RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 WNK3Q9BYP7 1800 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 A0A0D9SFI3 127 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 TSLPQ969D9 159 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 CGREF1Q99674 301 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 TCEAL7Q9BRU2 100 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
SMC4-215ENST00000484799 PTPRZ1P23471 2315 aaPredicted RBP0.53□□□□□ -2.33
SMC4-215ENST00000484799 KIF21AQ7Z4S6 1674 aa0.53□□□□□ -2.33
SMC4-215ENST00000484799 ZNF815PA8K554 130 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 HMGN4O00479 90 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 SSBP3-AS1Q7Z2R9 100 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 CNFNQ9BYD5 112 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 SCAPERQ9BY12 1400 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 ARHGAP5Q13017 1502 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 SBF2Q86WG5 1849 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 AHCTF1Q8WYP5 2266 aa0.52□□□□□ -2.33
SMC4-215ENST00000484799 NAP1L6A6NFF2 107 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 S100A3P33764 101 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 GNG11P61952 73 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 SPHKAPQ2M3C7 1700 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 TMEM170BQ5T4T1 132 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 FAM167A-AS1Q96KT0 104 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 LINC00474Q9P2X8 69 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 LINC01558Q9Y6Z2 57 aa0.51□□□□□ -2.33
SMC4-215ENST00000484799 IGLC7A0M8Q6 106 aa0.5□□□□□ -2.33
SMC4-215ENST00000484799 HSD52Q0P140 79 aa0.5□□□□□ -2.33
SMC4-215ENST00000484799 IGF2RP11717 2491 aa0.5□□□□□ -2.33
SMC4-215ENST00000484799 ZNF292O60281 2723 aa0.5□□□□□ -2.33
SMC4-215ENST00000484799 TET3O43151 1660 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 CHKB-CPT1BH3BT56 60 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 SFT2D2O95562 160 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 CDC42SE2Q9NRR3 84 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 PLXNB2O15031 1838 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 RAPGEF6Q8TEU7 1601 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 MAST4O15021 2626 aa0.49□□□□□ -2.33
SMC4-215ENST00000484799 ZFYVE16Q7Z3T8 1539 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 SHANK2Q9UPX8 1470 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 TMEM262E9PQX1 116 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 COX6CP09669 75 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 KRTDAPP60985 99 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 FAM213BQ8TBF2 198 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 SPCS1Q9Y6A9 102 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 DIP2CQ9Y2E4 1556 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 UNC79Q9P2D8 2635 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 ZNF236Q9UL36 1845 aa0.48□□□□□ -2.33
SMC4-215ENST00000484799 MGPP08493 103 aa0.47□□□□□ -2.33
SMC4-215ENST00000484799 UBE2D3P61077 147 aa0.47□□□□□ -2.33
SMC4-215ENST00000484799 UBE2D2P62837 147 aa0.47□□□□□ -2.33
SMC4-215ENST00000484799 HAMPP81172 84 aa0.47□□□□□ -2.33
SMC4-215ENST00000484799 Q5BKY6 102 aa0.47□□□□□ -2.33
SMC4-215ENST00000484799 NXT2Q9NPJ8 142 aaKnown RBP0.47□□□□□ -2.33
SMC4-215ENST00000484799 FAIMQ9NVQ4 179 aa0.47□□□□□ -2.33
SMC4-215ENST00000484799 LRP6O75581 1613 aa0.46□□□□□ -2.34
SMC4-215ENST00000484799 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
SMC4-215ENST00000484799 Q0VG73 95 aa0.46□□□□□ -2.34
SMC4-215ENST00000484799 LINC00472Q9H8W2 130 aa0.46□□□□□ -2.34
SMC4-215ENST00000484799 EHBP1L1Q8N3D4 1523 aa0.46□□□□□ -2.34
SMC4-215ENST00000484799 CACNA1CQ13936 2221 aa0.46□□□□□ -2.34
SMC4-215ENST00000484799 ARHGEF5Q12774 1597 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 ERCC6L2Q5T890 1561 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 OTOGQ6ZRI0 2925 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 TRAV22A0A0B4J277 110 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 TMEM218A2RU14 115 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 C14orf144Q96I85 54 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 C12orf57Q99622 126 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 MANBALQ9NQG1 85 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 PRO1854Q9UHT4 67 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 PRO0255Q9UI72 69 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 ZFHX3Q15911 3703 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 CC2D2AQ9P2K1 1620 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 C2CD3Q4AC94 2353 aa0.45□□□□□ -2.34
SMC4-215ENST00000484799 HMGXB3Q12766 1538 aa0.44□□□□□ -2.34
SMC4-215ENST00000484799 KDM5AP29375 1690 aaKnown RBP0.44□□□□□ -2.34
SMC4-215ENST00000484799 TOPAZ1Q8N9V7 1692 aa0.44□□□□□ -2.34
SMC4-215ENST00000484799 SPINK1P00995 79 aa0.44□□□□□ -2.34
SMC4-215ENST00000484799 Q6JHZ5 121 aa0.44□□□□□ -2.34
SMC4-215ENST00000484799 BIVM-ERCC5R4GMW8 1640 aa0.44□□□□□ -2.34
SMC4-215ENST00000484799 MRC2Q9UBG0 1479 aa0.43□□□□□ -2.34
SMC4-215ENST00000484799 CRYM-AS1A6NIL9 109 aa0.43□□□□□ -2.34
SMC4-215ENST00000484799 TRAPPC2P0DI81 140 aa0.43□□□□□ -2.34
SMC4-215ENST00000484799 TRAPPC2BP0DI82 140 aa0.43□□□□□ -2.34
SMC4-215ENST00000484799 SNCAP37840 140 aa0.43□□□□□ -2.34
SMC4-215ENST00000484799 ARL2-SNX15V9GYD0 113 aa0.43□□□□□ -2.34
SMC4-215ENST00000484799 PLCE1Q9P212 2302 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 CHD1O14646 1710 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 ABCA3Q99758 1704 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 TRAV30A0A087WSZ9 112 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 IGLC1P0CG04 106 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 RBP2P50120 134 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 TMEM263Q8WUH6 116 aaKnown RBP0.42□□□□□ -2.34
SMC4-215ENST00000484799 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 TOP2BQ02880 1626 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 KMT2DO14686 5537 aa0.42□□□□□ -2.34
SMC4-215ENST00000484799 FAM223AQ8IWN6 122 aa0.41□□□□□ -2.34
SMC4-215ENST00000484799 ACBD7Q8N6N7 88 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms