RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CBLN2Q8IUK8 224 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 LYPD6BQ8NI32 183 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 DPH3Q96FX2 82 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 ZC2HC1AQ96GY0 325 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 BTF3L4Q96K17 158 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-206ENST00000483030 SEC11CQ9BY50 192 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 TMEM126AQ9H061 195 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 ERG28Q9UKR5 140 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 PHLDA3Q9Y5J5 127 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 TRBV6-8A0A0A6YYG3 113 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 A0A0D9SG52 128 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 IFITM10A6NMD0 228 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 M0R381 172 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 CXorf1O96002 111 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 SULT1A2P50226 295 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 CRIP1P50238 77 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 SRSF3P84103 164 aaKnown RBP4.72□□□□□ -1.65
CSDE1-206ENST00000483030 MPV17L2Q567V2 206 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 TMEM167BQ9NRX6 74 aa4.72□□□□□ -1.65
CSDE1-206ENST00000483030 TMSB15BA0A087X1C1 80 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 BORCS7-ASMTA0A0B4J1R7 106 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 A0A1W2PRE2 83 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 SH2D1AO60880 128 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 VPREB1P12018 145 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 TPT1P13693 172 aaKnown RBP4.71□□□□□ -1.66
CSDE1-206ENST00000483030 RAB5AP20339 215 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 ATP6V0CP27449 155 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 MIAQ16674 131 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 IQCJQ1A5X6 159 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 MIEN1Q9BRT3 115 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 CHCHD5Q9BSY4 110 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 TNFSF18Q9UNG2 199 aa4.71□□□□□ -1.66
CSDE1-206ENST00000483030 MAP1LC3B2A6NCE7 125 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 K7EN84 100 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 PEX7O00628 323 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 GZMBP10144 247 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 SERF2P84101 59 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 FAM162BQ5T6X4 162 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 KRTAP26-1Q6PEX3 210 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 Q86TA4 180 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 NEXN-AS1Q8NBZ9 246 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 MAP1LC3BQ9GZQ8 125 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 PPDPFQ9H3Y8 114 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 DPH3P1Q9H4G8 78 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
CSDE1-206ENST00000483030 A0A087WYN8 130 aa4.69□□□□□ -1.66
CSDE1-206ENST00000483030 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
CSDE1-206ENST00000483030 TRIAP1O43715 76 aa4.69□□□□□ -1.66
CSDE1-206ENST00000483030 NTM-AS1Q6ZSK4 140 aa4.69□□□□□ -1.66
CSDE1-206ENST00000483030 PRR34Q9NV39 138 aa4.69□□□□□ -1.66
CSDE1-206ENST00000483030 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 IGLV10-54A0A075B6I4 117 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 TINCRA0A1B0GVN0 87 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 hDV102S1A0JD36 115 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 SLPIP03973 132 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 AMTP48728 403 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 CNBPP62633 177 aaKnown RBP4.68□□□□□ -1.66
CSDE1-206ENST00000483030 LRP2P98164 4655 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 CIRBPQ14011 172 aaKnown RBP4.68□□□□□ -1.66
CSDE1-206ENST00000483030 ZNF56Q15929 161 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 ZNF726P1Q15940 193 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 COX8CQ7Z4L0 72 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 FER1L6-AS1Q8NA97 138 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 MED28Q9H204 178 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 NAT8BQ9UHF3 227 aa4.68□□□□□ -1.66
CSDE1-206ENST00000483030 IGHV3-64A0A075B6Q5 118 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 MUC21A0A0G2JKD1 596 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 MUC21A0A140T8X8 626 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 F5H697 171 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 J3QR89 54 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 GNG4P50150 75 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 NDUFA6P56556 154 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 UBE2G1P62253 170 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
CSDE1-206ENST00000483030 CD164L2Q6UWJ8 174 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 OR10AG1Q8NH19 301 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 RNF185Q96GF1 192 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 LINC01600Q96MT4 127 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 DERL1Q9BUN8 251 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 MAP1LC3AQ9H492 121 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 LAMTOR2Q9Y2Q5 125 aa4.67□□□□□ -1.66
CSDE1-206ENST00000483030 TRBV25-1A0A075B6N4 114 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-206ENST00000483030 TRBV6-1A0A0K0K1D8 114 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 CTXND1A0A1B0GTU2 59 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 LTAP01374 205 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 RPL24P83731 157 aaKnown RBP4.66□□□□□ -1.66
CSDE1-206ENST00000483030 REG3AQ06141 175 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 HSD52Q0P140 79 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 PMVKQ15126 192 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 ALKAL2Q6UX46 152 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms