RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 WIZO95785 1651 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 PLCH1Q4KWH8 1693 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 ARHGEF5Q12774 1597 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 TRBV7-1A0A0A6YYK4 115 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 A6NIN4 97 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 PMCHL1Q16048 86 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 VMO1Q7Z5L0 202 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 C18orf32Q8TCD1 76 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 C22orf24Q9Y442 160 aa1.65□□□□□ -2.15
SF3B1-210ENST00000482158 URB2Q14146 1524 aaKnown RBP1.65□□□□□ -2.15
SF3B1-210ENST00000482158 MYOM1P52179 1685 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 MYO7BQ6PIF6 2116 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 PLXNC1O60486 1568 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 FBN3Q75N90 2809 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 TNRC6BQ9UPQ9 1833 aaKnown RBP1.64□□□□□ -2.15
SF3B1-210ENST00000482158 A0A0G2JND7 137 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 KANTRA0A1W2PQU2 76 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 C2orf70A6NJV1 201 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 F2Z2F3 143 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 SIX6O95475 246 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 LYNX1P0DP58 116 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 EFNA4P52798 201 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 UBE2D3P61077 147 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 UBE2D2P62837 147 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 KLKP1Q107X0 134 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 CFAP126Q5VTH2 177 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 C2orf82Q6UX34 121 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 CLECL1Q8IZS7 167 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 FAM167A-AS1Q96KT0 104 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 DLEC1Q9Y238 1755 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 PREX1Q8TCU6 1659 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 CTTNBP2Q8WZ74 1663 aa1.64□□□□□ -2.15
SF3B1-210ENST00000482158 IQSEC2Q5JU85 1478 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 RNF17Q9BXT8 1623 aaKnown RBP1.63□□□□□ -2.15
SF3B1-210ENST00000482158 TRAV12-3A0A0B4J271 114 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 TMEM30CPA0ZSE6 113 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 KRTAP10-4P60372 401 aaPredicted RBP1.63□□□□□ -2.15
SF3B1-210ENST00000482158 SNRPFP62306 86 aaKnown RBP1.63□□□□□ -2.15
SF3B1-210ENST00000482158 Q5VV11 94 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 Q8N6K4 173 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 BPESC1Q9GZL8 116 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 MANBALQ9NQG1 85 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 BRWD1Q9NSI6 2320 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 PI4KAP42356 2102 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 C1orf167Q5SNV9 1468 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 PRXQ9BXM0 1461 aa1.63□□□□□ -2.15
SF3B1-210ENST00000482158 PIK3C2BO00750 1634 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TOP2AP11388 1531 aaKnown RBP1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TSC2P49815 1807 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TRBV7-3A0A075B6L6 115 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TRAV22A0A0B4J277 110 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TRBV10-1A0A0K0K1A3 114 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TEX49A0A1B0GTD5 131 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 C7orf77A4D0Y5 90 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 BCE1O60756 84 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 IGHV3-33P01772 117 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 ZNF818PQ6ZRF7 136 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 FAM223AQ8IWN6 122 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 TET1Q8NFU7 2136 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 IFI27L1Q96BM0 104 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 PRO1854Q9UHT4 67 aa1.62□□□□□ -2.15
SF3B1-210ENST00000482158 PARP4Q9UKK3 1724 aaKnown RBP1.62□□□□□ -2.15
SF3B1-210ENST00000482158 COL14A1Q05707 1796 aaKnown RBP1.62□□□□□ -2.15
SF3B1-210ENST00000482158 MROH2AA6NES4 1674 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 NEXMIFQ5QGS0 1516 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 UBR3Q6ZT12 1888 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 NUP188Q5SRE5 1749 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 PKD1L3Q7Z443 1732 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 TRAV23DV6A0A075B6W5 121 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 A0A087WWC5 75 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 UBE2D1P51668 147 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 CNBPP62633 177 aaKnown RBP1.61□□□□□ -2.15
SF3B1-210ENST00000482158 PDE6HQ13956 83 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 TMEM170BQ5T4T1 132 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 CSAG1Q6PB30 78 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 NDUFA11Q86Y39 141 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 RREB1Q92766 1687 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 ASXL1Q8IXJ9 1541 aa1.61□□□□□ -2.15
SF3B1-210ENST00000482158 CRYBG1Q9Y4K1 1723 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 COL6A6A6NMZ7 2263 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 GLI2P10070 1586 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 LRRC37A3O60309 1634 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 ALKQ9UM73 1620 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 UMAD1C9J7I0 102 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 ANGP03950 147 aaKnown RBP1.6□□□□□ -2.15
SF3B1-210ENST00000482158 ACYP1P07311 99 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 ELOBQ15370 118 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 C1orf137Q5JT78 98 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 C10orf128Q5T292 105 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 SFTA2Q6UW10 78 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 LINC00643Q86TS7 51 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 UNC13CQ8NB66 2214 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 EHBP1L1Q8N3D4 1523 aa1.6□□□□□ -2.15
SF3B1-210ENST00000482158 MYO7AQ13402 2215 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 SHPRHQ149N8 1683 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 IGKV3-7A0A075B6H7 116 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 TRBV25-1A0A075B6N4 114 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 A0A087WXM4 84 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 CLPSL1A2RUU4 121 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 NUPR2A6NF83 97 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms