RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 RS1O15537 224 aa13.22□□□□□ -0.29
MRPL28-209ENST00000481453 SMCPP49901 116 aaPredicted RBP13.22□□□□□ -0.29
MRPL28-209ENST00000481453 CEMP1Q6PRD7 247 aaPredicted RBP13.22□□□□□ -0.29
MRPL28-209ENST00000481453 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
MRPL28-209ENST00000481453 Q9UF83 564 aa13.22□□□□□ -0.29
MRPL28-209ENST00000481453 A4D1N5 150 aa13.21□□□□□ -0.29
MRPL28-209ENST00000481453 CSNK1G2-AS1Q8NCQ2 148 aa13.21□□□□□ -0.29
MRPL28-209ENST00000481453 FAM104AQ969W3 186 aa13.21□□□□□ -0.29
MRPL28-209ENST00000481453 CITED1Q99966 193 aa13.21□□□□□ -0.29
MRPL28-209ENST00000481453 TMEM238C9JI98 176 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 TCL1BO95988 128 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 SCGB1C2P0DMR2 95 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 TMEM263Q8WUH6 116 aaKnown RBP13.2□□□□□ -0.3
MRPL28-209ENST00000481453 C1QTNF4Q9BXJ3 329 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 TRBV20-1A0A075B6N2 111 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 CRYBA4P53673 196 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
MRPL28-209ENST00000481453 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
MRPL28-209ENST00000481453 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
MRPL28-209ENST00000481453 IGHV3-30-3P0DP02 117 aa13.19□□□□□ -0.3
MRPL28-209ENST00000481453 MUSTN1Q8IVN3 82 aa13.19□□□□□ -0.3
MRPL28-209ENST00000481453 ATP6V0E2Q8NHE4 81 aa13.19□□□□□ -0.3
MRPL28-209ENST00000481453 SPATA25Q9BR10 227 aa13.19□□□□□ -0.3
MRPL28-209ENST00000481453 PLAC8L1A1L4L8 177 aa13.18□□□□□ -0.3
MRPL28-209ENST00000481453 IGHV3-53P01767 116 aa13.18□□□□□ -0.3
MRPL28-209ENST00000481453 FOXI1Q12951 378 aa13.18□□□□□ -0.3
MRPL28-209ENST00000481453 A0A0J9YXY3 114 aa13.17□□□□□ -0.3
MRPL28-209ENST00000481453 CHCHD7Q9BUK0 85 aa13.17□□□□□ -0.3
MRPL28-209ENST00000481453 TRGV1A0A0A0MS02 117 aa13.17□□□□□ -0.3
MRPL28-209ENST00000481453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.16□□□□□ -0.3
MRPL28-209ENST00000481453 TRAV8-3A0A0A6YYJ7 113 aa13.16□□□□□ -0.3
MRPL28-209ENST00000481453 IGKV2-29A2NJV5 120 aaPredicted RBP13.16□□□□□ -0.3
MRPL28-209ENST00000481453 SMAGPQ0VAQ4 97 aa13.16□□□□□ -0.3
MRPL28-209ENST00000481453 Q6ZTI0 123 aa13.16□□□□□ -0.3
MRPL28-209ENST00000481453 SPANXA1Q9NS26 97 aa13.16□□□□□ -0.3
MRPL28-209ENST00000481453 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
MRPL28-209ENST00000481453 EIF4EBP3O60516 100 aaPredicted RBP13.16□□□□□ -0.3
MRPL28-209ENST00000481453 UBE2D4Q9Y2X8 147 aa13.16□□□□□ -0.3
MRPL28-209ENST00000481453 A0A0B4J2C4 111 aa13.15□□□□□ -0.3
MRPL28-209ENST00000481453 IGHV3-33P01772 117 aa13.15□□□□□ -0.3
MRPL28-209ENST00000481453 C9orf66Q5T8R8 295 aa13.15□□□□□ -0.3
MRPL28-209ENST00000481453 ERG28Q9UKR5 140 aa13.15□□□□□ -0.3
MRPL28-209ENST00000481453 VWFP04275 2813 aa13.15□□□□□ -0.3
MRPL28-209ENST00000481453 IGHV3-38A0A0C4DH36 116 aa13.15□□□□□ -0.31
MRPL28-209ENST00000481453 IGHV1-58A0A0C4DH39 117 aa13.15□□□□□ -0.31
MRPL28-209ENST00000481453 H7C2G1 150 aa13.15□□□□□ -0.31
MRPL28-209ENST00000481453 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.14□□□□□ -0.31
MRPL28-209ENST00000481453 TINCRA0A1B0GVN0 87 aa13.14□□□□□ -0.31
MRPL28-209ENST00000481453 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
MRPL28-209ENST00000481453 C16orf74Q96GX8 76 aa13.14□□□□□ -0.31
MRPL28-209ENST00000481453 DNAJC30Q96LL9 226 aa13.14□□□□□ -0.31
MRPL28-209ENST00000481453 F8P00451 2351 aa13.13□□□□□ -0.31
MRPL28-209ENST00000481453 SCGB1A1P11684 91 aa13.13□□□□□ -0.31
MRPL28-209ENST00000481453 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
MRPL28-209ENST00000481453 Q6ZUT4 128 aa13.12□□□□□ -0.31
MRPL28-209ENST00000481453 TEN1Q86WV5 123 aa13.12□□□□□ -0.31
MRPL28-209ENST00000481453 NDUFA12Q9UI09 145 aa13.12□□□□□ -0.31
MRPL28-209ENST00000481453 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
MRPL28-209ENST00000481453 PRSS2P07478 247 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 SPINK8P0C7L1 97 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 Q1RN00 199 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 LITAFQ99732 161 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 TRAV4A0A0B4J268 109 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 PPDPFLQ8WWR9 84 aa13.11□□□□□ -0.31
MRPL28-209ENST00000481453 GEMIN7Q9H840 131 aaKnown RBP13.11□□□□□ -0.31
MRPL28-209ENST00000481453 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
MRPL28-209ENST00000481453 A8MZ25 164 aa13.09□□□□□ -0.31
MRPL28-209ENST00000481453 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
MRPL28-209ENST00000481453 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
MRPL28-209ENST00000481453 ADAMTSL4-AS1Q5T5F5 129 aa13.08□□□□□ -0.32
MRPL28-209ENST00000481453 DGAT2L7PQ6IED9 249 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 TEP1Q99973 2627 aaKnown RBP13.07□□□□□ -0.32
MRPL28-209ENST00000481453 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 ATRQ13535 2644 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 C9JAW5 83 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 SLC25A20O43772 301 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 ANKRD29Q8N6D5 301 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 WFDC9Q8NEX5 89 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
MRPL28-209ENST00000481453 GAGE7O76087 117 aa13.06□□□□□ -0.32
MRPL28-209ENST00000481453 GAGE12FP0CL80 117 aa13.06□□□□□ -0.32
MRPL28-209ENST00000481453 GAGE12GP0CL81 117 aa13.06□□□□□ -0.32
MRPL28-209ENST00000481453 GAGE12IP0CL82 117 aa13.06□□□□□ -0.32
MRPL28-209ENST00000481453 K7EQD1 137 aa13.05□□□□□ -0.32
MRPL28-209ENST00000481453 CDIP1Q9H305 208 aa13.05□□□□□ -0.32
MRPL28-209ENST00000481453 CDKN2A-AS1Q9UH64 79 aa13.05□□□□□ -0.32
MRPL28-209ENST00000481453 MIAQ16674 131 aa13.05□□□□□ -0.32
MRPL28-209ENST00000481453 ZFAND6Q6FIF0 208 aa13.05□□□□□ -0.32
MRPL28-209ENST00000481453 NPC2P61916 151 aa13.04□□□□□ -0.32
MRPL28-209ENST00000481453 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
MRPL28-209ENST00000481453 TIRAPP58753 221 aa13.04□□□□□ -0.32
MRPL28-209ENST00000481453 ATXN8Q156A1 80 aa13.04□□□□□ -0.32
MRPL28-209ENST00000481453 X6R8D5 127 aa13.03□□□□□ -0.32
MRPL28-209ENST00000481453 TRGV2A0A075B6R0 118 aa13.03□□□□□ -0.32
MRPL28-209ENST00000481453 TRBV30A0A0K0K1B3 111 aa13.03□□□□□ -0.32
MRPL28-209ENST00000481453 WIPF1O43516 503 aa13.02□□□□□ -0.33
MRPL28-209ENST00000481453 TRIAP1O43715 76 aa13.02□□□□□ -0.33
MRPL28-209ENST00000481453 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms