RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 MRPS16Q9Y3D3 137 aaKnown RBP7□□□□□ -1.29
USP39-215ENST00000481409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
USP39-215ENST00000481409 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
USP39-215ENST00000481409 CCL25O15444 150 aa6.99□□□□□ -1.29
USP39-215ENST00000481409 PMVKQ15126 192 aa6.99□□□□□ -1.29
USP39-215ENST00000481409 ESRGQ1W209 222 aa6.99□□□□□ -1.29
USP39-215ENST00000481409 OR10D4PQ8NGN7 298 aa6.99□□□□□ -1.29
USP39-215ENST00000481409 C2orf88Q9BSF0 95 aa6.99□□□□□ -1.29
USP39-215ENST00000481409 VCX2Q9H322 139 aa6.99□□□□□ -1.29
USP39-215ENST00000481409 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 A0A087WX48 190 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 C3orf84H3BNL1 204 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 SYS1-DBNDD2H3BUS1 97 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 PRSS1P07477 247 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 SEC11AP67812 179 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 LGALS9CQ6DKI2 356 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 TEX43Q6ZNM6 134 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 AMELXQ99217 191 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
USP39-215ENST00000481409 PRKDCP78527 4128 aaKnown RBP6.97□□□□□ -1.29
USP39-215ENST00000481409 LOC105371267A0A1B0GV96 52 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 TMEM262E9PQX1 116 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 C3orf79P0CE67 100 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 KRTDAPP60985 99 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 GAGE6Q13070 117 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 ZNF664Q8N3J9 261 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 BAALCQ8WXS3 180 aa6.97□□□□□ -1.29
USP39-215ENST00000481409 STAB2Q8WWQ8 2551 aa6.96□□□□□ -1.29
USP39-215ENST00000481409 DNAH10OSP0CZ25 163 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 RBX1P62877 108 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 JOSD1Q15040 202 aaPredicted RBP6.96□□□□□ -1.3
USP39-215ENST00000481409 LINC01545Q5VT33 79 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 FAM19A3Q7Z5A8 133 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 C10orf126Q8N4M7 172 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 DEFB104AQ8WTQ1 72 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 CST9LQ9H4G1 147 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.3
USP39-215ENST00000481409 FBN3Q75N90 2809 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 F8VRH5 84 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 SIVA1O15304 175 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 PLNP26678 52 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 MPV17L2Q567V2 206 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
USP39-215ENST00000481409 PRSS29PA6NIE9 313 aa6.94□□□□□ -1.3
USP39-215ENST00000481409 ODF1Q14990 250 aa6.94□□□□□ -1.3
USP39-215ENST00000481409 Q6ZUT4 128 aa6.94□□□□□ -1.3
USP39-215ENST00000481409 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
USP39-215ENST00000481409 IGLV4-60A0A075B6I1 120 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 TINCRA0A1B0GVN0 87 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 DPM2O94777 84 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 ANGP03950 147 aaKnown RBP6.93□□□□□ -1.3
USP39-215ENST00000481409 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 NFE4Q86UQ8 179 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 WFDC10BQ8IUB3 73 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 UBE2DNLQ8IWF7 75 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 PRR34Q9NV39 138 aa6.93□□□□□ -1.3
USP39-215ENST00000481409 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 UBE2D1P51668 147 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 HERVK_113P63121 156 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 SS18Q15532 418 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 MIAQ16674 131 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 Q9H8V8 135 aa6.92□□□□□ -1.3
USP39-215ENST00000481409 H0Y8G0 127 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 IGKCP01834 107 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 CRPP02741 224 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 REG3AQ06141 175 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 TTC32Q5I0X7 151 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 Q8N976 141 aa6.91□□□□□ -1.3
USP39-215ENST00000481409 OPRPNQ99935 248 aaPredicted RBP6.91□□□□□ -1.3
USP39-215ENST00000481409 TRAV8-3A0A0A6YYJ7 113 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 LINC00959A0A1B0GUT2 108 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 PYY3Q5JQD4 70 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 ZFAND6Q6FIF0 208 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 LINC01561Q8N1V8 128 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 LINC00269Q8N2A0 174 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 RMI2Q96E14 147 aa6.9□□□□□ -1.3
USP39-215ENST00000481409 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.3
USP39-215ENST00000481409 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.3
USP39-215ENST00000481409 IGLV4-69A0A075B6H9 119 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 C11orf86A6NJI1 115 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 HSBP1L1C9JCN9 74 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 H3BRM9 83 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 IGHV3-30-3P0DP02 117 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 S100A12P80511 92 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 COX11Q9Y6N1 276 aa6.89□□□□□ -1.31
USP39-215ENST00000481409 TRAV13-1A0A0B4J241 112 aa6.88□□□□□ -1.31
USP39-215ENST00000481409 HERVK_113P61574 105 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms