RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 PLNP26678 52 aa10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 GAGE6Q13070 117 aa10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 LYPD5Q6UWN5 251 aa10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 Q6ZUT4 128 aa10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 OPRPNQ99935 248 aaPredicted RBP10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 C2orf88Q9BSF0 95 aa10.22□□□□□ -0.77
SNRNP200-205ENST00000480835 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 IGKCP01834 107 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 CDPF1Q6NVV7 123 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 ZNF664Q8N3J9 261 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 PMCHL2Q9BQD1 86 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 VAMP8Q9BV40 100 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
SNRNP200-205ENST00000480835 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
SNRNP200-205ENST00000480835 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
SNRNP200-205ENST00000480835 HSBP1L1C9JCN9 74 aa10.2□□□□□ -0.78
SNRNP200-205ENST00000480835 ATOH7Q8N100 152 aa10.2□□□□□ -0.78
SNRNP200-205ENST00000480835 DNAH9Q9NYC9 4486 aa10.2□□□□□ -0.78
SNRNP200-205ENST00000480835 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
SNRNP200-205ENST00000480835 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
SNRNP200-205ENST00000480835 IGLV4-69A0A075B6H9 119 aa10.17□□□□□ -0.78
SNRNP200-205ENST00000480835 IGLL5B9A064 214 aa10.17□□□□□ -0.78
SNRNP200-205ENST00000480835 IGLC3P0DOY3 106 aa10.17□□□□□ -0.78
SNRNP200-205ENST00000480835 RBX1P62877 108 aa10.17□□□□□ -0.78
SNRNP200-205ENST00000480835 NFE4Q86UQ8 179 aa10.17□□□□□ -0.78
SNRNP200-205ENST00000480835 IGLV4-60A0A075B6I1 120 aa10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 UBE2D1P51668 147 aa10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 SEC11AP67812 179 aa10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 ESRGQ1W209 222 aa10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 MPV17L2Q567V2 206 aa10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 RNASE13Q5GAN3 156 aaKnown RBP10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 PAM16Q9Y3D7 125 aa10.16□□□□□ -0.78
SNRNP200-205ENST00000480835 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
SNRNP200-205ENST00000480835 hDV102S1A0JD36 115 aa10.15□□□□□ -0.78
SNRNP200-205ENST00000480835 NUPR2A6NF83 97 aa10.15□□□□□ -0.78
SNRNP200-205ENST00000480835 SPATA45Q537H7 98 aa10.15□□□□□ -0.78
SNRNP200-205ENST00000480835 FAM19A3Q7Z5A8 133 aa10.15□□□□□ -0.78
SNRNP200-205ENST00000480835 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
SNRNP200-205ENST00000480835 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
SNRNP200-205ENST00000480835 CHAC1Q9BUX1 264 aa10.14□□□□□ -0.79
SNRNP200-205ENST00000480835 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
SNRNP200-205ENST00000480835 CCL25O15444 150 aa10.13□□□□□ -0.79
SNRNP200-205ENST00000480835 CCL18P55774 89 aa10.13□□□□□ -0.79
SNRNP200-205ENST00000480835 TCTAP57738 103 aa10.13□□□□□ -0.79
SNRNP200-205ENST00000480835 MRPS16Q9Y3D3 137 aaKnown RBP10.13□□□□□ -0.79
SNRNP200-205ENST00000480835 HERVK_113P61574 105 aa10.12□□□□□ -0.79
SNRNP200-205ENST00000480835 HERVK_113P63121 156 aa10.12□□□□□ -0.79
SNRNP200-205ENST00000480835 MAJINQ3KP22 176 aa10.12□□□□□ -0.79
SNRNP200-205ENST00000480835 GEMIN7Q9H840 131 aaKnown RBP10.12□□□□□ -0.79
SNRNP200-205ENST00000480835 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
SNRNP200-205ENST00000480835 TSTD3H0UI37 97 aa10.11□□□□□ -0.79
SNRNP200-205ENST00000480835 ZNF22P17026 224 aaPredicted RBP10.11□□□□□ -0.79
SNRNP200-205ENST00000480835 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
SNRNP200-205ENST00000480835 STPG4Q8N801 248 aa10.11□□□□□ -0.79
SNRNP200-205ENST00000480835 ANGP03950 147 aaKnown RBP10.1□□□□□ -0.79
SNRNP200-205ENST00000480835 ANKRD39Q53RE8 183 aa10.1□□□□□ -0.79
SNRNP200-205ENST00000480835 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
SNRNP200-205ENST00000480835 WFDC10BQ8IUB3 73 aa10.1□□□□□ -0.79
SNRNP200-205ENST00000480835 APLNQ9ULZ1 77 aa10.1□□□□□ -0.79
SNRNP200-205ENST00000480835 IGLV5-45A0A087WSX0 123 aa10.09□□□□□ -0.79
SNRNP200-205ENST00000480835 LINC00959A0A1B0GUT2 108 aa10.09□□□□□ -0.79
SNRNP200-205ENST00000480835 H3BRM9 83 aa10.09□□□□□ -0.79
SNRNP200-205ENST00000480835 SS18Q15532 418 aa10.09□□□□□ -0.79
SNRNP200-205ENST00000480835 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
SNRNP200-205ENST00000480835 E9PLD3 99 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 UPK3BQ9BT76 320 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 LINC00588Q9Y4M8 146 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 STAB2Q8WWQ8 2551 aa10.08□□□□□ -0.8
SNRNP200-205ENST00000480835 IGKV3OR2-268A0A0C4DH90 116 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 IGHV3-30P01768 117 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 DNAH10OSP0CZ25 163 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 IGHV3-30-3P0DP02 117 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 IGHV3-30-5P0DP03 117 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 REG3AQ06141 175 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 MEGF8Q7Z7M0 2845 aa10.07□□□□□ -0.8
SNRNP200-205ENST00000480835 Q8N3U1 123 aa10.06□□□□□ -0.8
SNRNP200-205ENST00000480835 UQCR10Q9UDW1 63 aa10.06□□□□□ -0.8
SNRNP200-205ENST00000480835 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
SNRNP200-205ENST00000480835 SIVA1O15304 175 aa10.05□□□□□ -0.8
SNRNP200-205ENST00000480835 COX8AP10176 69 aa10.05□□□□□ -0.8
SNRNP200-205ENST00000480835 COX6A2Q02221 97 aa10.05□□□□□ -0.8
SNRNP200-205ENST00000480835 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
SNRNP200-205ENST00000480835 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
SNRNP200-205ENST00000480835 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
SNRNP200-205ENST00000480835 CRPP02741 224 aa10.04□□□□□ -0.8
SNRNP200-205ENST00000480835 NMUP48645 174 aa10.04□□□□□ -0.8
SNRNP200-205ENST00000480835 SLC25A34Q6PIV7 304 aa10.04□□□□□ -0.8
SNRNP200-205ENST00000480835 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
SNRNP200-205ENST00000480835 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
SNRNP200-205ENST00000480835 C14orf144Q96I85 54 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms