RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TMEM243Q9BU79 118 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 CHCHD7Q9BUK0 85 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 CBY1Q9Y3M2 126 aa4.41□□□□□ -1.7
HERC4-210ENST00000480158 IGHV3-30P01768 117 aa4.4□□□□□ -1.7
HERC4-210ENST00000480158 IGHV3-33P01772 117 aa4.4□□□□□ -1.7
HERC4-210ENST00000480158 IGHV3-30-3P0DP02 117 aa4.4□□□□□ -1.7
HERC4-210ENST00000480158 IGHV3-30-5P0DP03 117 aa4.4□□□□□ -1.7
HERC4-210ENST00000480158 FABP4P15090 132 aa4.4□□□□□ -1.7
HERC4-210ENST00000480158 RPL32P62910 135 aaKnown RBP4.4□□□□□ -1.7
HERC4-210ENST00000480158 RNASE13Q5GAN3 156 aaKnown RBP4.4□□□□□ -1.7
HERC4-210ENST00000480158 LELP1Q5T871 98 aa4.4□□□□□ -1.7
HERC4-210ENST00000480158 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.7
HERC4-210ENST00000480158 TRAV8-6A0A0B4J262 113 aa4.4□□□□□ -1.71
HERC4-210ENST00000480158 C3orf84H3BNL1 204 aa4.4□□□□□ -1.71
HERC4-210ENST00000480158 LY6G6CO95867 125 aa4.4□□□□□ -1.71
HERC4-210ENST00000480158 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
HERC4-210ENST00000480158 ORMDL2Q53FV1 153 aa4.4□□□□□ -1.71
HERC4-210ENST00000480158 AMMECR1LQ6DCA0 310 aa4.4□□□□□ -1.71
HERC4-210ENST00000480158 C2orf66Q6UXQ4 117 aa4.4□□□□□ -1.71
HERC4-210ENST00000480158 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
HERC4-210ENST00000480158 A0A087WX48 190 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 IGKV3OR2-268A0A0C4DH90 116 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 PLA2G1BP04054 148 aaKnown RBP4.39□□□□□ -1.71
HERC4-210ENST00000480158 ESDP10768 282 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 CLPSL2Q6UWE3 100 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
HERC4-210ENST00000480158 CHCHD1Q96BP2 118 aaKnown RBP4.39□□□□□ -1.71
HERC4-210ENST00000480158 A0A096LNJ9 63 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 FGF6P10767 208 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 TIRAPP58753 221 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 TMEM97Q5BJF2 176 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 Q9H8V8 135 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 CYSLTR1Q9Y271 337 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 IGLV4-60A0A075B6I1 120 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 H0Y8G0 127 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 HBDP02042 147 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 ZC2HC1BQ5TFG8 222 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 SCGB3A1Q96QR1 104 aa4.38□□□□□ -1.71
HERC4-210ENST00000480158 M0R2N4 97 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 SIVA1O15304 175 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 ANGP03950 147 aaKnown RBP4.37□□□□□ -1.71
HERC4-210ENST00000480158 PCP4P48539 62 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 TCTAP57738 103 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 RBX1P62877 108 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 KLK12Q9UKR0 248 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 UBE2D4Q9Y2X8 147 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 MRPS16Q9Y3D3 137 aaKnown RBP4.37□□□□□ -1.71
HERC4-210ENST00000480158 LINC01546A6NGU7 62 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 K7EMI3 77 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 LINC00269Q8N2A0 174 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 TMEM18Q96B42 140 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 TMEM101Q96IK0 257 aa4.37□□□□□ -1.71
HERC4-210ENST00000480158 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
HERC4-210ENST00000480158 S100A2P29034 98 aa4.36□□□□□ -1.71
HERC4-210ENST00000480158 Q6ZUT4 128 aa4.36□□□□□ -1.71
HERC4-210ENST00000480158 OR5A1Q8NGJ0 315 aa4.36□□□□□ -1.71
HERC4-210ENST00000480158 COA6Q5JTJ3 125 aaKnown RBP4.36□□□□□ -1.71
HERC4-210ENST00000480158 Q9HAA7 133 aa4.36□□□□□ -1.71
HERC4-210ENST00000480158 IGLV10-54A0A075B6I4 117 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 TRAV13-1A0A0B4J241 112 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 C5orf52A6NGY3 159 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 C9orf118A6NHY6 69 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 IGIPA6NJ69 53 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.35□□□□□ -1.71
HERC4-210ENST00000480158 PRSS1P07477 247 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 ERASQ7Z444 233 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 ZNF664Q8N3J9 261 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 LINC00476Q8WZB0 136 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 FAM104AQ969W3 186 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 UBE2WQ96B02 151 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 IGLV4-3A0A075B6K6 122 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 G0S2P27469 103 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 Q6ZN92 141 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 UPK3BQ9BT76 320 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 VCX2Q9H322 139 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 CDC42SE2Q9NRR3 84 aa4.35□□□□□ -1.71
HERC4-210ENST00000480158 H7C423 109 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 KRTDAPP60985 99 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 REG3AQ06141 175 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 MRPL52Q86TS9 123 aaKnown RBP4.34□□□□□ -1.71
HERC4-210ENST00000480158 IFI27L1Q96BM0 104 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 TMEM141Q96I45 108 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 HIST1H2BLQ99880 126 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 SPANXA1Q9NS26 97 aa4.34□□□□□ -1.71
HERC4-210ENST00000480158 DYNC2H1Q8NCM8 4307 aaKnown RBP4.34□□□□□ -1.71
HERC4-210ENST00000480158 A0A1B0GUV1 79 aa4.34□□□□□ -1.72
HERC4-210ENST00000480158 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms