RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 COX6CP09669 75 aa17.69■□□□□ 0.42
SYNGAP1-206ENST00000479510 RPL36AP83881 106 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-206ENST00000479510 RPL36ALQ969Q0 106 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-206ENST00000479510 ICOSQ9Y6W8 199 aa17.69■□□□□ 0.42
SYNGAP1-206ENST00000479510 FBN2P35556 2912 aa17.69■□□□□ 0.42
SYNGAP1-206ENST00000479510 A0A1B0GV72 72 aa17.68■□□□□ 0.42
SYNGAP1-206ENST00000479510 CIRBPQ14011 172 aaKnown RBP17.68■□□□□ 0.42
SYNGAP1-206ENST00000479510 TMEM101Q96IK0 257 aa17.68■□□□□ 0.42
SYNGAP1-206ENST00000479510 IGHV3OR16-12A0A075B7B8 117 aa17.67■□□□□ 0.42
SYNGAP1-206ENST00000479510 TRGV1A0A0A0MS02 117 aa17.67■□□□□ 0.42
SYNGAP1-206ENST00000479510 TRBV10-2A0A0K0K1G8 114 aa17.67■□□□□ 0.42
SYNGAP1-206ENST00000479510 TRAV4A0A0B4J268 109 aa17.67■□□□□ 0.42
SYNGAP1-206ENST00000479510 K7EQD1 137 aa17.67■□□□□ 0.42
SYNGAP1-206ENST00000479510 CCL24O00175 119 aa17.67■□□□□ 0.42
SYNGAP1-206ENST00000479510 DNAJC9-AS1A6NH13 148 aa17.66■□□□□ 0.42
SYNGAP1-206ENST00000479510 CRYBG3Q68DQ2 2970 aa17.66■□□□□ 0.42
SYNGAP1-206ENST00000479510 A8MZ25 164 aa17.65■□□□□ 0.42
SYNGAP1-206ENST00000479510 RPL13AP40429 203 aaKnown RBP17.65■□□□□ 0.42
SYNGAP1-206ENST00000479510 ZNF462Q96JM2 2506 aa17.65■□□□□ 0.42
SYNGAP1-206ENST00000479510 LINC00242Q5T6M2 205 aa17.65■□□□□ 0.42
SYNGAP1-206ENST00000479510 COPS9Q8WXC6 57 aa17.65■□□□□ 0.42
SYNGAP1-206ENST00000479510 ZANQ9Y493 2812 aa17.65■□□□□ 0.42
SYNGAP1-206ENST00000479510 UTP20O75691 2785 aaKnown RBP17.64■□□□□ 0.41
SYNGAP1-206ENST00000479510 CIDEAO60543 219 aa17.63■□□□□ 0.41
SYNGAP1-206ENST00000479510 XGP55808 180 aa17.63■□□□□ 0.41
SYNGAP1-206ENST00000479510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.63■□□□□ 0.41
SYNGAP1-206ENST00000479510 MXRA5Q9NR99 2828 aa17.63■□□□□ 0.41
SYNGAP1-206ENST00000479510 FAM208BQ5VWN6 2430 aa17.62■□□□□ 0.41
SYNGAP1-206ENST00000479510 POLQO75417 2590 aa17.62■□□□□ 0.41
SYNGAP1-206ENST00000479510 COX6A2Q02221 97 aa17.62■□□□□ 0.41
SYNGAP1-206ENST00000479510 MT-ATP8P03928 68 aa17.61■□□□□ 0.41
SYNGAP1-206ENST00000479510 NAV2Q8IVL1 2488 aa17.61■□□□□ 0.41
SYNGAP1-206ENST00000479510 H3BT86 120 aa17.6■□□□□ 0.41
SYNGAP1-206ENST00000479510 FAM110AQ9BQ89 295 aa17.6■□□□□ 0.41
SYNGAP1-206ENST00000479510 Q6ZTI0 123 aa17.6■□□□□ 0.41
SYNGAP1-206ENST00000479510 PPDPFQ9H3Y8 114 aa17.6■□□□□ 0.41
SYNGAP1-206ENST00000479510 PTPN13Q12923 2485 aa17.59■□□□□ 0.41
SYNGAP1-206ENST00000479510 UBR5O95071 2799 aaPredicted RBP17.58■□□□□ 0.41
SYNGAP1-206ENST00000479510 LINC00694P0DN24 101 aa17.58■□□□□ 0.4
SYNGAP1-206ENST00000479510 NTM-AS1Q6ZSK4 140 aa17.58■□□□□ 0.4
SYNGAP1-206ENST00000479510 NTN5Q8WTR8 489 aaPredicted RBP17.58■□□□□ 0.4
SYNGAP1-206ENST00000479510 Q9H8V8 135 aa17.58■□□□□ 0.4
SYNGAP1-206ENST00000479510 SMIM1B2RUZ4 78 aa17.57■□□□□ 0.4
SYNGAP1-206ENST00000479510 CDC42SE2Q9NRR3 84 aa17.57■□□□□ 0.4
SYNGAP1-206ENST00000479510 LST1O00453 97 aa17.57■□□□□ 0.4
SYNGAP1-206ENST00000479510 CKS1BP61024 79 aa17.57■□□□□ 0.4
SYNGAP1-206ENST00000479510 LINC00308Q8TCZ7 52 aa17.57■□□□□ 0.4
SYNGAP1-206ENST00000479510 C16orf74Q96GX8 76 aa17.57■□□□□ 0.4
SYNGAP1-206ENST00000479510 H7C423 109 aa17.56■□□□□ 0.4
SYNGAP1-206ENST00000479510 LRRK2Q5S007 2527 aa17.56■□□□□ 0.4
SYNGAP1-206ENST00000479510 A0A1W2PRX2 142 aa17.56■□□□□ 0.4
SYNGAP1-206ENST00000479510 HERV-K104P63124 156 aa17.56■□□□□ 0.4
SYNGAP1-206ENST00000479510 HIST2H2BDQ6DRA6 164 aa17.56■□□□□ 0.4
SYNGAP1-206ENST00000479510 NPC2P61916 151 aa17.55■□□□□ 0.4
SYNGAP1-206ENST00000479510 C2orf82Q6UX34 121 aa17.55■□□□□ 0.4
SYNGAP1-206ENST00000479510 C16orf95Q9H693 158 aa17.55■□□□□ 0.4
SYNGAP1-206ENST00000479510 UBE2WQ96B02 151 aa17.54■□□□□ 0.4
SYNGAP1-206ENST00000479510 ZNF625Q96I27 306 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-206ENST00000479510 CITED2Q99967 270 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-206ENST00000479510 TMEM243Q9BU79 118 aa17.53■□□□□ 0.4
SYNGAP1-206ENST00000479510 ESM1Q9NQ30 184 aa17.53■□□□□ 0.4
SYNGAP1-206ENST00000479510 CSMD2Q7Z408 3487 aa17.53■□□□□ 0.4
SYNGAP1-206ENST00000479510 F5H768 121 aa17.52■□□□□ 0.4
SYNGAP1-206ENST00000479510 GIG44P09565 113 aaPredicted RBP17.52■□□□□ 0.4
SYNGAP1-206ENST00000479510 MYO9AB2RTY4 2548 aa17.52■□□□□ 0.4
SYNGAP1-206ENST00000479510 GAGE12JA6NER3 117 aa17.52■□□□□ 0.39
SYNGAP1-206ENST00000479510 GAGE4Q13068 117 aa17.52■□□□□ 0.39
SYNGAP1-206ENST00000479510 GAGE5Q13069 117 aa17.52■□□□□ 0.39
SYNGAP1-206ENST00000479510 C11orf44Q8N8P7 122 aa17.52■□□□□ 0.39
SYNGAP1-206ENST00000479510 NOP10Q9NPE3 64 aaKnown RBP17.52■□□□□ 0.39
SYNGAP1-206ENST00000479510 TRAV13-1A0A0B4J241 112 aa17.51■□□□□ 0.39
SYNGAP1-206ENST00000479510 OVOL2Q9BRP0 275 aa17.51■□□□□ 0.39
SYNGAP1-206ENST00000479510 TRBV6-4A0A1B0GX49 114 aa17.51■□□□□ 0.39
SYNGAP1-206ENST00000479510 DAND5Q8N907 189 aa17.51■□□□□ 0.39
SYNGAP1-206ENST00000479510 WFDC11Q8NEX6 87 aa17.51■□□□□ 0.39
SYNGAP1-206ENST00000479510 UBE2L6O14933 153 aa17.5■□□□□ 0.39
SYNGAP1-206ENST00000479510 TEX15Q9BXT5 2789 aa17.5■□□□□ 0.39
SYNGAP1-206ENST00000479510 PLAC8L1A1L4L8 177 aa17.49■□□□□ 0.39
SYNGAP1-206ENST00000479510 TEX49A0A1B0GTD5 131 aa17.49■□□□□ 0.39
SYNGAP1-206ENST00000479510 PRIMA1Q86XR5 153 aa17.49■□□□□ 0.39
SYNGAP1-206ENST00000479510 RNASE1P07998 156 aaKnown RBP17.48■□□□□ 0.39
SYNGAP1-206ENST00000479510 CITED1Q99966 193 aa17.48■□□□□ 0.39
SYNGAP1-206ENST00000479510 TRAV8-4A0A0B4J246 113 aa17.48■□□□□ 0.39
SYNGAP1-206ENST00000479510 IGLV1-51P01701 117 aa17.48■□□□□ 0.39
SYNGAP1-206ENST00000479510 DEFB121Q5J5C9 76 aa17.48■□□□□ 0.39
SYNGAP1-206ENST00000479510 CLEC2BQ92478 149 aa17.48■□□□□ 0.39
SYNGAP1-206ENST00000479510 NDUFA7O95182 113 aa17.47■□□□□ 0.39
SYNGAP1-206ENST00000479510 LINC01006Q8NI28 216 aa17.47■□□□□ 0.39
SYNGAP1-206ENST00000479510 TRGV2A0A075B6R0 118 aa17.46■□□□□ 0.39
SYNGAP1-206ENST00000479510 C19orf73Q9NVV2 129 aa17.46■□□□□ 0.39
SYNGAP1-206ENST00000479510 SHISA2Q6UWI4 295 aa17.45■□□□□ 0.38
SYNGAP1-206ENST00000479510 COX7A2LO14548 114 aa17.44■□□□□ 0.38
SYNGAP1-206ENST00000479510 MEIG1Q5JSS6 88 aa17.44■□□□□ 0.38
SYNGAP1-206ENST00000479510 FAM240AA0A1B0GVK7 77 aa17.44■□□□□ 0.38
SYNGAP1-206ENST00000479510 CSNK1G2-AS1Q8NCQ2 148 aa17.44■□□□□ 0.38
SYNGAP1-206ENST00000479510 ABCA12Q86UK0 2595 aa17.43■□□□□ 0.38
SYNGAP1-206ENST00000479510 GAGE7O76087 117 aa17.43■□□□□ 0.38
SYNGAP1-206ENST00000479510 GAGE12FP0CL80 117 aa17.43■□□□□ 0.38
SYNGAP1-206ENST00000479510 GAGE12GP0CL81 117 aa17.43■□□□□ 0.38
SYNGAP1-206ENST00000479510 GAGE12IP0CL82 117 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms