RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TMEM89A2RUT3 159 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 IGHV3-30-3P0DP02 117 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 LINC00315P59091 139 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 C9orf139Q6ZV77 190 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 COX7A2LO14548 114 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 Q5XG85 94 aa9.72□□□□□ -0.85
CNKSR3-204ENST00000479339 IGHV3-23P01764 117 aa9.71□□□□□ -0.86
CNKSR3-204ENST00000479339 SUMO4Q6EEV6 95 aa9.71□□□□□ -0.86
CNKSR3-204ENST00000479339 ZFAND2AQ8N6M9 145 aa9.71□□□□□ -0.86
CNKSR3-204ENST00000479339 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 SPRY2O43597 315 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 IGHV4-38-2P0DP08 117 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 COX7A1P24310 79 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 UPK3BQ9BT76 320 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 ANK2Q01484 3957 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 WNK2Q9Y3S1 2297 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 FBN3Q75N90 2809 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 RNASE4P34096 147 aaKnown RBP9.7□□□□□ -0.86
CNKSR3-204ENST00000479339 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 IGHV1-58A0A0C4DH39 117 aa9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 APRG1Q8IVJ8 170 aa9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
CNKSR3-204ENST00000479339 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 HRCT1Q6UXD1 115 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 IGHV3OR16-10A0A075B7F0 116 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 CLPSL1A2RUU4 121 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 MALP21145 153 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 ADAMTSL4-AS1Q5T5F5 129 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 DPM3Q9P2X0 92 aa9.68□□□□□ -0.86
CNKSR3-204ENST00000479339 OXTP01178 125 aa9.67□□□□□ -0.86
CNKSR3-204ENST00000479339 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
CNKSR3-204ENST00000479339 Q6JHZ5 121 aa9.67□□□□□ -0.86
CNKSR3-204ENST00000479339 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
CNKSR3-204ENST00000479339 COPS9Q8WXC6 57 aa9.67□□□□□ -0.86
CNKSR3-204ENST00000479339 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 ZNF415Q09FC8 603 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 LY6G5BQ8NDX9 201 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 SIRPDQ9H106 197 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 JPT2Q9H910 190 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 PRO0628Q9UI54 55 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 U3KQE9 123 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 F8WDY8 70 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 TIRAPP58753 221 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 NDPQ00604 133 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
CNKSR3-204ENST00000479339 VMO1Q7Z5L0 202 aa9.65□□□□□ -0.86
CNKSR3-204ENST00000479339 FAM110DQ8TAY7 271 aaPredicted RBP9.65□□□□□ -0.86
CNKSR3-204ENST00000479339 CYSTM1Q9H1C7 97 aa9.65□□□□□ -0.86
CNKSR3-204ENST00000479339 PYGO1Q9Y3Y4 419 aa9.65□□□□□ -0.86
CNKSR3-204ENST00000479339 NDUFC2O95298 119 aa9.65□□□□□ -0.87
CNKSR3-204ENST00000479339 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.87
CNKSR3-204ENST00000479339 DEFB112Q30KQ8 113 aa9.65□□□□□ -0.87
CNKSR3-204ENST00000479339 BEAN1Q3B7T3 259 aa9.65□□□□□ -0.87
CNKSR3-204ENST00000479339 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.87
CNKSR3-204ENST00000479339 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
CNKSR3-204ENST00000479339 F5H697 171 aa9.64□□□□□ -0.87
CNKSR3-204ENST00000479339 Q6ZSV7 163 aa9.64□□□□□ -0.87
CNKSR3-204ENST00000479339 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
CNKSR3-204ENST00000479339 ZNF580Q9UK33 172 aa9.64□□□□□ -0.87
CNKSR3-204ENST00000479339 IGHV3-35A0A0C4DH35 117 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 Q6YL49 198 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 OPRPNQ99935 248 aaPredicted RBP9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 M0R1W7 72 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 GNRH2O43555 120 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 CIRBPQ14011 172 aaKnown RBP9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 TMEM86BQ8N661 226 aa9.63□□□□□ -0.87
CNKSR3-204ENST00000479339 IGF1P05019 195 aa9.62□□□□□ -0.87
CNKSR3-204ENST00000479339 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
CNKSR3-204ENST00000479339 DNAL4O96015 105 aa9.61□□□□□ -0.87
CNKSR3-204ENST00000479339 PRB3Q04118 309 aaPredicted RBP9.61□□□□□ -0.87
CNKSR3-204ENST00000479339 Q8N6K4 173 aa9.61□□□□□ -0.87
CNKSR3-204ENST00000479339 OVOL2Q9BRP0 275 aa9.61□□□□□ -0.87
CNKSR3-204ENST00000479339 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
CNKSR3-204ENST00000479339 M0QY20 66 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 NDUFA1O15239 70 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 CD28P10747 220 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 NPC2P61916 151 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 RNF152Q8N8N0 203 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 USP17L23D6RBM5 183 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 PSMB8P28062 276 aa9.6□□□□□ -0.87
CNKSR3-204ENST00000479339 A0A087WWL8 130 aa9.59□□□□□ -0.87
CNKSR3-204ENST00000479339 IGHV7-81A0A0B4J1V7 117 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms