RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 NACAE9PAV3 2078 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 IGLV5-45A0A087WSX0 123 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 TMEM223A0PJW6 202 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 J3QQQ9 107 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 K7EQD1 137 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 K7ERU9 68 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 TIRAPP58753 221 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
CMSS1-203ENST00000478909 HERVK_113P63121 156 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 RRN3P1Q2M238 152 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 TMEM170BQ5T4T1 132 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 C1orf158Q8N1D5 194 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 SLC25A29Q8N8R3 303 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 PPDPFQ9H3Y8 114 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 WNK1Q9H4A3 2382 aa4.38□□□□□ -1.71
CMSS1-203ENST00000478909 NOTCH2Q04721 2471 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 JMJD1CQ15652 2540 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 HECTD1Q9ULT8 2610 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 TRGV1A0A0A0MS02 117 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-203ENST00000478909 A0A0J9YXY3 114 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 TIMM17BO60830 172 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 HTN1P15515 57 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 ZNF22P17026 224 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-203ENST00000478909 FXYD2P54710 66 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
CMSS1-203ENST00000478909 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
CMSS1-203ENST00000478909 C9orf66Q5T8R8 295 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 SFTA2Q6UW10 78 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 ZNRF2Q8NHG8 242 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 KIR2DL5BQ8NHK3 375 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 PHLDA1Q8WV24 401 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-203ENST00000478909 CHCHD7Q9BUK0 85 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 NHP2Q9NX24 153 aaKnown RBP4.37□□□□□ -1.71
CMSS1-203ENST00000478909 UBE2D4Q9Y2X8 147 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 SPCS1Q9Y6A9 102 aa4.37□□□□□ -1.71
CMSS1-203ENST00000478909 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 A0A0J9YY99 117 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 F8W1H4 67 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 H3BUT2 72 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 SPRY2O43597 315 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 UBE2D1P51668 147 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 UBE2D3P61077 147 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 UBE2D2P62837 147 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 C12orf74Q32Q52 190 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 DGAT2L7PQ6IED9 249 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 MAPKAPK5-AS1Q8N8E1 139 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 CSNK1G2-AS1Q8NCQ2 148 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 ZNF479Q96JC4 524 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 MRPL16Q9NX20 251 aaKnown RBP4.36□□□□□ -1.71
CMSS1-203ENST00000478909 CBY1Q9Y3M2 126 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 SELENOKQ9Y6D0 94 aa4.36□□□□□ -1.71
CMSS1-203ENST00000478909 C2CD3Q4AC94 2353 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 TRBV20-1A0A075B6N2 111 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 LY6G6DO95868 133 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 GIG44P09565 113 aaPredicted RBP4.35□□□□□ -1.71
CMSS1-203ENST00000478909 IFITM1P13164 125 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 APOC4P55056 127 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 LINC00612Q8N6U2 182 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 TMEM101Q96IK0 257 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 GEMIN7Q9H840 131 aaKnown RBP4.35□□□□□ -1.71
CMSS1-203ENST00000478909 ZFHX3Q15911 3703 aa4.35□□□□□ -1.71
CMSS1-203ENST00000478909 TRGV2A0A075B6R0 118 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 A0A0B4J2C4 111 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 TEX48A0A1B0GUV7 120 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 IGLL5B9A064 214 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 J3QR89 54 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
CMSS1-203ENST00000478909 ZFAND6Q6FIF0 208 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 C11orf44Q8N8P7 122 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 VSIG2Q96IQ7 327 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 SPANXDQ9BXN6 97 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
CMSS1-203ENST00000478909 AKAP9Q99996 3911 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 NBPF19A0A087WUL8 3843 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 IGHV3-73A0A0B4J1V6 119 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 IGLV5-39A0A0G2JS06 123 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 A0A0J9YXV3 536 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 PLAC8L1A1L4L8 177 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 M0QXV9 152 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 UBE2L6O14933 153 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 NDUFA1O15239 70 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 CRLF1O75462 422 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 LINC00694P0DN24 101 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 IGHV3-30-3P0DP02 117 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 TCTAP57738 103 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 KRTAP10-11P60412 298 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 HERV-K104P63124 156 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 Q6ZTI0 123 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 SH2D6Q7Z4S9 175 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 SBSPONQ8IVN8 264 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms