RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 RTL8CO15255 209 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 CRPP02741 224 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 LINC00310P59036 64 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 REG3AQ06141 175 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 RNASE13Q5GAN3 156 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 OPRPNQ99935 248 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-207ENST00000478769 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 RAB5BP61020 215 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 DGAT2L7PQ6IED9 249 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 ZNF664Q8N3J9 261 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
NUDCD3-207ENST00000478769 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
NUDCD3-207ENST00000478769 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
NUDCD3-207ENST00000478769 SERF1AO75920 110 aa9.05□□□□□ -0.96
NUDCD3-207ENST00000478769 CHCHD1Q96BP2 118 aaKnown RBP9.05□□□□□ -0.96
NUDCD3-207ENST00000478769 PKD1P98161 4303 aa9.04□□□□□ -0.96
NUDCD3-207ENST00000478769 IGIPA6NJ69 53 aa9.04□□□□□ -0.96
NUDCD3-207ENST00000478769 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
NUDCD3-207ENST00000478769 MIAQ16674 131 aa9.04□□□□□ -0.96
NUDCD3-207ENST00000478769 NFE4Q86UQ8 179 aa9.04□□□□□ -0.96
NUDCD3-207ENST00000478769 IGLV10-54A0A075B6I4 117 aa9.03□□□□□ -0.96
NUDCD3-207ENST00000478769 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
NUDCD3-207ENST00000478769 C1orf196B1AJZ1 125 aa9.03□□□□□ -0.96
NUDCD3-207ENST00000478769 HBDP02042 147 aa9.03□□□□□ -0.96
NUDCD3-207ENST00000478769 G0S2P27469 103 aa9.03□□□□□ -0.96
NUDCD3-207ENST00000478769 TIMM17AQ99595 171 aa9.03□□□□□ -0.96
NUDCD3-207ENST00000478769 NUPR1O60356 82 aa9.02□□□□□ -0.97
NUDCD3-207ENST00000478769 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.97
NUDCD3-207ENST00000478769 LINC00173Q6ZV60 143 aa9.02□□□□□ -0.97
NUDCD3-207ENST00000478769 RMI2Q96E14 147 aa9.02□□□□□ -0.97
NUDCD3-207ENST00000478769 SCGB3A1Q96QR1 104 aa9.02□□□□□ -0.97
NUDCD3-207ENST00000478769 C1orf43Q9BWL3 253 aa9.02□□□□□ -0.97
NUDCD3-207ENST00000478769 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 HSBP1O75506 76 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 NPSP0C0P6 89 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 PDZD11Q5EBL8 140 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 ZC2HC1BQ5TFG8 222 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 ERASQ7Z444 233 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 FAM19A2Q8N3H0 131 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 TMEM141Q96I45 108 aa9.01□□□□□ -0.97
NUDCD3-207ENST00000478769 PKHD1P08F94 4074 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 TRAV13-1A0A0B4J241 112 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 TRAV8-4A0A0B4J246 113 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 LINC01549A6NIU2 74 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 IFITM10A6NMD0 228 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 TNP2Q05952 138 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 MAPKAPK5-AS1Q8N8E1 139 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
NUDCD3-207ENST00000478769 TM2D2Q9BX73 214 aa9□□□□□ -0.97
NUDCD3-207ENST00000478769 PSCAO43653 123 aa8.99□□□□□ -0.97
NUDCD3-207ENST00000478769 Q6ZN92 141 aa8.99□□□□□ -0.97
NUDCD3-207ENST00000478769 AMELXQ99217 191 aa8.99□□□□□ -0.97
NUDCD3-207ENST00000478769 DNAH5Q8TE73 4624 aa8.99□□□□□ -0.97
NUDCD3-207ENST00000478769 CCL25O15444 150 aa8.98□□□□□ -0.97
NUDCD3-207ENST00000478769 XCL1P47992 114 aa8.98□□□□□ -0.97
NUDCD3-207ENST00000478769 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
NUDCD3-207ENST00000478769 TEX43Q6ZNM6 134 aa8.98□□□□□ -0.97
NUDCD3-207ENST00000478769 BAALCQ8WXS3 180 aa8.98□□□□□ -0.97
NUDCD3-207ENST00000478769 COX11Q9Y6N1 276 aa8.98□□□□□ -0.97
NUDCD3-207ENST00000478769 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 PRSS29PA6NIE9 313 aa8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 WFDC2Q14508 124 aa8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 SS18Q15532 418 aa8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 VCX2Q9H322 139 aa8.97□□□□□ -0.97
NUDCD3-207ENST00000478769 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 LECT2O14960 151 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 UBE2D1P51668 147 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 NDUFA6P56556 154 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 FOXI1Q12951 378 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 C2orf88Q9BSF0 95 aa8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.98
NUDCD3-207ENST00000478769 A0A087WTM6 91 aa8.95□□□□□ -0.98
NUDCD3-207ENST00000478769 ATP5LO75964 103 aa8.95□□□□□ -0.98
NUDCD3-207ENST00000478769 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
NUDCD3-207ENST00000478769 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
NUDCD3-207ENST00000478769 CD164L2Q6UWJ8 174 aa8.94□□□□□ -0.98
NUDCD3-207ENST00000478769 CST9LQ9H4G1 147 aa8.94□□□□□ -0.98
NUDCD3-207ENST00000478769 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
NUDCD3-207ENST00000478769 PMVKQ15126 192 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms