RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 RMI2Q96E14 147 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 IMMP2LQ96T52 175 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 TM2D2Q9BX73 214 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 IGLV4-60A0A075B6I1 120 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 A0A087WTM6 91 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 IGKV3OR2-268A0A0C4DH90 116 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 TRBV27A0A0K0K1C4 114 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 C16orf90A8MZG2 172 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 GHRHP01286 108 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 POLR2KP53803 58 aaKnown RBP4.6□□□□□ -1.67
BRCA1-215ENST00000478531 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 Q0VG73 95 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 ENHOQ6UWT2 76 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 ERASQ7Z444 233 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 PRELID3AQ96N28 172 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 KIR2DL4Q99706 377 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 IGLV10-54A0A075B6I4 117 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 VCYO14598 125 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 PPBPP02775 128 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 REG3AQ06141 175 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 SVBPQ8N300 66 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 C20orf203Q8NBC4 194 aa4.59□□□□□ -1.67
BRCA1-215ENST00000478531 TRBV24-1A0A075B6N3 115 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 FGF6P10767 208 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 MALP21145 153 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 MIAQ16674 131 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 BAALCQ8WXS3 180 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 C20orf78Q9BR46 151 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 SMIM2Q9BVW6 85 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 COX11Q9Y6N1 276 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 KIAA1109Q2LD37 5005 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 TRAV9-1A0A075B6T8 112 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 LOC389332A0A1B0GUA5 103 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 LRCOL1A6NCL2 159 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 WFDC2Q14508 124 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 KIAA1644Q3SXP7 199 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 MAPKAPK5-AS1Q8N8E1 139 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
BRCA1-215ENST00000478531 APOBP04114 4563 aaKnown RBP4.57□□□□□ -1.68
BRCA1-215ENST00000478531 H7C423 109 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 PHOX2AO14813 284 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 TCAPO15273 167 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 ESDP10768 282 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 OR5A1Q8NGJ0 315 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 MAP1LC3AQ9H492 121 aa4.57□□□□□ -1.68
BRCA1-215ENST00000478531 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-215ENST00000478531 TGIF2-C20orf24A0A0A6YYL0 155 aa4.56□□□□□ -1.68
BRCA1-215ENST00000478531 ZNF25P17030 456 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-215ENST00000478531 RPL39P62891 51 aaKnown RBP4.56□□□□□ -1.68
BRCA1-215ENST00000478531 RPL32P62910 135 aaKnown RBP4.56□□□□□ -1.68
BRCA1-215ENST00000478531 Q8N814 137 aa4.56□□□□□ -1.68
BRCA1-215ENST00000478531 RAB5AP20339 215 aa4.56□□□□□ -1.68
BRCA1-215ENST00000478531 LBHQ53QV2 105 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-215ENST00000478531 RNASE13Q5GAN3 156 aaKnown RBP4.56□□□□□ -1.68
BRCA1-215ENST00000478531 C12orf57Q99622 126 aa4.56□□□□□ -1.68
BRCA1-215ENST00000478531 GNB1LQ9BYB4 327 aa4.56□□□□□ -1.68
BRCA1-215ENST00000478531 LAMTOR2Q9Y2Q5 125 aa4.56□□□□□ -1.68
BRCA1-215ENST00000478531 HSPG2P98160 4391 aa4.55□□□□□ -1.68
BRCA1-215ENST00000478531 IGLV5-52A0A0A0MRZ9 124 aa4.55□□□□□ -1.68
BRCA1-215ENST00000478531 LINC00614P0C842 121 aa4.55□□□□□ -1.68
BRCA1-215ENST00000478531 SEC61GP60059 68 aa4.55□□□□□ -1.68
BRCA1-215ENST00000478531 TMEM18Q96B42 140 aa4.55□□□□□ -1.68
BRCA1-215ENST00000478531 MRPL18Q9H0U6 180 aaKnown RBP4.55□□□□□ -1.68
BRCA1-215ENST00000478531 RYR1P21817 5038 aa4.55□□□□□ -1.68
BRCA1-215ENST00000478531 TRAV8-4A0A0B4J246 113 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 USP17L23D6RBM5 183 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 SMAGPQ0VAQ4 97 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 FABP9Q0Z7S8 132 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 Q6ZUT4 128 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
BRCA1-215ENST00000478531 CBLN2Q8IUK8 224 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 BOD1L2Q8IYS8 172 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 ZNF664Q8N3J9 261 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 UBE2D4Q9Y2X8 147 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 HERC2O95714 4834 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 GAGE12HA6NDE8 117 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 MT-ND6P03923 174 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-215ENST00000478531 XCL1P47992 114 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 COX19Q49B96 90 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 Q8N8P6 123 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
BRCA1-215ENST00000478531 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
BRCA1-215ENST00000478531 A0A0U1RRA0 63 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 KRTAP26-1Q6PEX3 210 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 NTN5Q8WTR8 489 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-215ENST00000478531 NXT2Q9NPJ8 142 aaKnown RBP4.53□□□□□ -1.68
BRCA1-215ENST00000478531 TRAPPC1Q9Y5R8 145 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 TRAV13-1A0A0B4J241 112 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 LINC00959A0A1B0GUT2 108 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 A0A1B0GV90 55 aa4.53□□□□□ -1.68
BRCA1-215ENST00000478531 FAM229AH3BQW9 127 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms