RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 POLA1P09884 1462 aaPredicted RBP1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 NRXN1Q9ULB1 1477 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 UNC13BO14795 1591 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 ARHGEF5Q12774 1597 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 EXPH5Q8NEV8 1989 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 TMEM14DPA8MWL7 114 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 SPCS1Q9Y6A9 102 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 V9GYH0 126 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 V9GYV3 84 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 FANCAO15360 1455 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 DNMBPQ6XZF7 1577 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 DIP2BQ9P265 1576 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 DIP2CQ9Y2E4 1556 aa1.42□□□□□ -2.18
SMARCA1-204ENST00000478420 TANC1Q9C0D5 1861 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 EHBP1L1Q8N3D4 1523 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 EFNA4P52798 201 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 KLKP1Q107X0 134 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 ETDBQ3ZM63 59 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 CCL19Q99731 98 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 RABAC1Q9UI14 185 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 MYO7AQ13402 2215 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 MYOM1P52179 1685 aa1.41□□□□□ -2.18
SMARCA1-204ENST00000478420 HMGXB3Q12766 1538 aa1.4□□□□□ -2.18
SMARCA1-204ENST00000478420 PLXNA1Q9UIW2 1896 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 NLRP1Q9C000 1473 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 TRBV25-1A0A075B6N4 114 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 LOC285095A0A1B0GVY8 99 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 A0A1W2PPM0 123 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 CAV3P56539 151 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 Q6ZQY7 126 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 Q86TA4 180 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 PPP1R1CQ8WVI7 109 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 Q96NJ1 140 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 ST20Q9HBF5 79 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 MED13LQ71F56 2210 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 DLG5Q8TDM6 1919 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 PSME4Q14997 1843 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 DOCK2Q92608 1830 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 KIF14Q15058 1648 aa1.4□□□□□ -2.19
SMARCA1-204ENST00000478420 ARFGEF1Q9Y6D6 1849 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 WFDC2Q14508 124 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 NMSQ5H8A3 153 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 TMEM170BQ5T4T1 132 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 AMELXQ99217 191 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 WFDC6Q9BQY6 131 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 TMEM14BQ9NUH8 114 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 R4GMQ9 66 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 ARL2-SNX15V9GYD0 113 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 PPLO60437 1756 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 RGPD4Q7Z3J3 1758 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 E9PCH4 1651 aa1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 CLTCQ00610 1675 aaKnown RBP1.39□□□□□ -2.19
SMARCA1-204ENST00000478420 CEP350Q5VT06 3117 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 CCDC88BA6NC98 1476 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 MYO3AQ8NEV4 1616 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 FAM223BA6NKX1 122 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 F8VRH5 84 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 M0R135 149 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 ADIRFQ15847 76 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 PMCHL1Q16048 86 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 CACNA1BQ00975 2339 aa1.38□□□□□ -2.19
SMARCA1-204ENST00000478420 TRGV1A0A0A0MS02 117 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 BCE1O60756 84 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 SAA2P0DJI9 122 aaPredicted RBP1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 LINC01600Q96MT4 127 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 LINC01558Q9Y6Z2 57 aa1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 ASCC3Q8N3C0 2202 aaKnown RBP1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 AFDNP55196 1824 aaKnown RBP1.37□□□□□ -2.19
SMARCA1-204ENST00000478420 SIPA1L3O60292 1781 aaPredicted RBP1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 MYH4Q9Y623 1939 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 KIF20BQ96Q89 1820 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 F2Z2F3 143 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 PSMG4Q5JS54 123 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 BVES-AS1Q5T3Y7 98 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 CFAP126Q5VTH2 177 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 BAGE3Q86Y29 109 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 RGPD3A6NKT7 1758 aaPredicted RBP1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 MAP3K4Q9Y6R4 1608 aa1.36□□□□□ -2.19
SMARCA1-204ENST00000478420 SCN7AQ01118 1682 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ZMYM4Q5VZL5 1548 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 UBR1Q8IWV7 1749 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 LRRIQ1Q96JM4 1722 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 DNAJC13O75165 2243 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ABCA1O95477 2261 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 TRAV1-2A0A0B4J238 106 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 CTXND1A0A1B0GTU2 59 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ZNF815PA8K554 130 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 F8WEM9 126 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 IGLC2P0DOY2 106 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 IGLC3P0DOY3 106 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ZNF137PP52743 207 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 SNRPFP62306 86 aaKnown RBP1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 C10orf99Q6UWK7 81 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 BAGE2Q86Y30 109 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms