RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 RAPGEF6Q8TEU7 1601 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 PATJQ8NI35 1801 aa-1.71□□□□□ -2.68
NCKAP1-204ENST00000477988 BORCS7-ASMTA0A0B4J1R7 106 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 TRBV7-4A0A0J9YYF1 115 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 LINC00959A0A1B0GUT2 108 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 SYS1-DBNDD2H3BUS1 97 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 COX8AP10176 69 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 HSD11B1P28845 292 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 RPRMQ9NS64 109 aa-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 LSM2Q9Y333 95 aaKnown RBP-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 POLA1P09884 1462 aaPredicted RBP-1.72□□□□□ -2.68
NCKAP1-204ENST00000477988 EIF3AQ14152 1382 aaKnown RBP-1.72□□□□□ -2.69
NCKAP1-204ENST00000477988 CTXND1A0A1B0GTU2 59 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 E7EQ34 232 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 H3BNG1 76 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 FAM107AO95990 144 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 IFNA17P01571 189 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 RBP4P02753 201 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 RPL7P18124 248 aaKnown RBP-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 MT1XP80297 61 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 H1FX-AS1Q4G0G2 97 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 TMEM170BQ5T4T1 132 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 TMEM78Q5T7P6 136 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 SPANXN1Q5VSR9 72 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 Q6AWC8 147 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 STX12Q86Y82 276 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 CCDC115Q96NT0 180 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 LINC00312Q9Y6C7 94 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 ACACBO00763 2458 aa-1.73□□□□□ -2.69
NCKAP1-204ENST00000477988 OVOS2A0A0G2JMS6 1433 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 DNAH5Q8TE73 4624 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 MAGI1Q96QZ7 1491 aaPredicted RBP-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 DNAH17Q9UFH2 4485 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 H0YAA0 97 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 YPEL1O60688 119 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 PPP1R17O96001 155 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 HLA-DRB4P13762 266 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 CLLU1Q5K131 121 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 VSTM2AQ8TAG5 236 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 R4GMQ9 66 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 HLA-DRB4X5D2U9 266 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 SETBP1Q9Y6X0 1596 aa-1.74□□□□□ -2.69
NCKAP1-204ENST00000477988 SMG1Q96Q15 3661 aaKnown RBP-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 NKTRP30414 1462 aaKnown RBP-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 MYH13Q9UKX3 1938 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 A0A1W2PRE2 83 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 H0YGG7 62 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 NIPSNAP2O75323 286 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 PIPP12273 146 aaPredicted RBP-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 TCTAP57738 103 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 DCUN1D2Q6PH85 259 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 CCDC32Q9BV29 185 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 BANF2Q9H503 90 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 STOML2Q9UJZ1 356 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 QRICH2Q9H0J4 1663 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 BTAF1O14981 1849 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 DOCK2Q92608 1830 aa-1.75□□□□□ -2.69
NCKAP1-204ENST00000477988 ARHGEF5Q12774 1597 aa-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 TRRAPQ9Y4A5 3859 aa-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 CICQ96RK0 1608 aaPredicted RBP-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 A0A0G2JMZ2 1700 aa-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 SPAARA0A1B0GVQ0 90 aa-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 CPSF4LA6NMK7 179 aaKnown RBP-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 SERPINB1P30740 379 aa-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 TLN1Q9Y490 2541 aaKnown RBP-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 DISP2A7MBM2 1401 aa-1.76□□□□□ -2.69
NCKAP1-204ENST00000477988 PDE4DIPQ5VU43 2346 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 MYOM1P52179 1685 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 DEFB1P60022 68 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 UBE2G1P62253 170 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 CCL8P80075 99 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 USMG5Q96IX5 58 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 CEP19Q96LK0 163 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 LENEPQ9Y5L5 61 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 V9GYH0 126 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 SHANK2Q9UPX8 1470 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 SYNJ1O43426 1573 aa-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 XRN1Q8IZH2 1706 aaKnown RBP-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 COL14A1Q05707 1796 aaKnown RBP-1.77□□□□□ -2.69
NCKAP1-204ENST00000477988 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 K7EP34 96 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 MT-ND4LP03901 98 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 REEP5Q00765 189 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 SPTSSBQ8NFR3 76 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 CFAP53Q96M91 514 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 ARHGEF10O15013 1369 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 TMEM2Q9UHN6 1383 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 TLN2Q9Y4G6 2542 aa-1.78□□□□□ -2.69
NCKAP1-204ENST00000477988 MYO9AB2RTY4 2548 aa-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 IFT140Q96RY7 1462 aa-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 ANKRD50Q9ULJ7 1429 aa-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 DPM2O94777 84 aa-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 MIC13Q5XKP0 118 aa-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 RPL7L1Q6DKI1 246 aaKnown RBP-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 MNS1Q8NEH6 495 aa-1.79□□□□□ -2.7
NCKAP1-204ENST00000477988 LRBAP50851 2863 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 ARAP2Q8WZ64 1704 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 SHROOM2Q13796 1616 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 TRBV20-1A0A075B6N2 111 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 UQCR11O14957 56 aa-1.8□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms