RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 UBE2L6O14933 153 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 SPART-AS1P0CW21 52 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 LINC00694P0DN24 101 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 IGHV4-30-4P0DP06 118 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 HINT1P49773 126 aaPredicted RBP5.63□□□□□ -1.51
VMA21-203ENST00000477649 TIRAPP58753 221 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 BATFQ16520 125 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 MPV17L2Q567V2 206 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 BVES-AS1Q5T3Y7 98 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 FAM19A3Q7Z5A8 133 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 PCP2Q8IVA1 136 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 PHLDA1Q8WV24 401 aaPredicted RBP5.63□□□□□ -1.51
VMA21-203ENST00000477649 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 CHAC1Q9BUX1 264 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 JMJD1CQ15652 2540 aa5.63□□□□□ -1.51
VMA21-203ENST00000477649 TRAV26-1A0A087WT03 109 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 IGKV2D-26A0A0A0MRZ7 120 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 TRAV8-6A0A0B4J262 113 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 GAGE12JA6NER3 117 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 H3BRM9 83 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 EMP1P54849 157 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 GAGE1Q13065 139 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 GAGE4Q13068 117 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 GAGE5Q13069 117 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 TMEM170BQ5T4T1 132 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 SBSPONQ8IVN8 264 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 ORAOV1Q8WV07 137 aa5.62□□□□□ -1.51
VMA21-203ENST00000477649 TMEM223A0PJW6 202 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 LEPROTO15243 131 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 DEFB130BP0DP73 79 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 DEFB130AP0DP74 79 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 HERVK_113P63121 156 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 DEFB135Q30KP9 77 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 FAM222AQ5U5X8 452 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 AMMECR1LQ6DCA0 310 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 Q8NAQ8 132 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 OR5A1Q8NGJ0 315 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 MDFIQ99750 246 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 TM2D2Q9BX73 214 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
VMA21-203ENST00000477649 COL6A5A8TX70 2615 aa5.61□□□□□ -1.51
VMA21-203ENST00000477649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
VMA21-203ENST00000477649 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 TRBV6-8A0A0A6YYG3 113 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 IGHV4-28A0A0C4DH34 117 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 IGHV3-38A0A0C4DH36 116 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
VMA21-203ENST00000477649 ZNF815PA8K554 130 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 CCL25O15444 150 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 ATP5G1P05496 136 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 ZNF22P17026 224 aaPredicted RBP5.6□□□□□ -1.51
VMA21-203ENST00000477649 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
VMA21-203ENST00000477649 UBE2D1P51668 147 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 DAD1P61803 113 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 ATP6V0E2Q8NHE4 81 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 Q9UF83 564 aa5.6□□□□□ -1.51
VMA21-203ENST00000477649 NACAE9PAV3 2078 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 STAB1Q9NY15 2570 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 A0A0J9YXV3 536 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 A0A1B0GV90 55 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 A6NJY4 79 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 J3QQQ9 107 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 NTM-AS1Q6ZSK4 140 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 PRIMA1Q86XR5 153 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 FAM104AQ969W3 186 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 CDC42SE2Q9NRR3 84 aa5.59□□□□□ -1.51
VMA21-203ENST00000477649 SPANXB1Q9NS25 103 aaPredicted RBP5.59□□□□□ -1.51
VMA21-203ENST00000477649 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 H3BNG1 76 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 GYPEP15421 78 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 OXLD1Q5BKU9 147 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 SCGB1D4Q6XE38 83 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 Q6ZUT4 128 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 Q6ZVH6 145 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 CEND1Q8N111 149 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 MAPKAPK5-AS1Q8N8E1 139 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 DEFB104AQ8WTQ1 72 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 HIST1H4GQ99525 98 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 OPRPNQ99935 248 aaPredicted RBP5.58□□□□□ -1.52
VMA21-203ENST00000477649 C11orf68Q9H3H3 251 aaKnown RBP5.58□□□□□ -1.52
VMA21-203ENST00000477649 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 NBEAL1Q6ZS30 2694 aa5.58□□□□□ -1.52
VMA21-203ENST00000477649 ANK2Q01484 3957 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 ATRQ13535 2644 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 TMEM238C9JI98 176 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 GCSHP23434 173 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 PTTG1IPP53801 180 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
VMA21-203ENST00000477649 SAMD5Q5TGI4 173 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 SFTA2Q6UW10 78 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 VSIG2Q96IQ7 327 aa5.57□□□□□ -1.52
VMA21-203ENST00000477649 A0A0J9YY99 117 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms