RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 PRB2P02812 416 aaPredicted RBP14.36□□□□□ -0.11
ITGA4-207ENST00000476089 HTN3P15516 51 aa14.36□□□□□ -0.11
ITGA4-207ENST00000476089 TMEM170BQ5T4T1 132 aa14.36□□□□□ -0.11
ITGA4-207ENST00000476089 Q6ZUT4 128 aa14.36□□□□□ -0.11
ITGA4-207ENST00000476089 NFE4Q86UQ8 179 aa14.36□□□□□ -0.11
ITGA4-207ENST00000476089 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
ITGA4-207ENST00000476089 TP73-AS1Q9UF72 201 aa14.36□□□□□ -0.11
ITGA4-207ENST00000476089 A0A0J9YY99 117 aa14.35□□□□□ -0.11
ITGA4-207ENST00000476089 DLEU1O43261 78 aa14.35□□□□□ -0.11
ITGA4-207ENST00000476089 RNASE13Q5GAN3 156 aaKnown RBP14.35□□□□□ -0.11
ITGA4-207ENST00000476089 PCP2Q8IVA1 136 aa14.35□□□□□ -0.11
ITGA4-207ENST00000476089 TMEM101Q96IK0 257 aa14.35□□□□□ -0.11
ITGA4-207ENST00000476089 C11orf68Q9H3H3 251 aaKnown RBP14.35□□□□□ -0.11
ITGA4-207ENST00000476089 DEFB121Q5J5C9 76 aa14.34□□□□□ -0.11
ITGA4-207ENST00000476089 KPRPQ5T749 579 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-207ENST00000476089 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
ITGA4-207ENST00000476089 TRAV26-1A0A087WT03 109 aa14.33□□□□□ -0.12
ITGA4-207ENST00000476089 A0A0J9YXV3 536 aa14.33□□□□□ -0.12
ITGA4-207ENST00000476089 E9PLD3 99 aa14.33□□□□□ -0.12
ITGA4-207ENST00000476089 VSIG2Q96IQ7 327 aa14.33□□□□□ -0.12
ITGA4-207ENST00000476089 CHCHD5Q9BSY4 110 aa14.32□□□□□ -0.12
ITGA4-207ENST00000476089 SNHG12Q9BXW3 62 aa14.32□□□□□ -0.12
ITGA4-207ENST00000476089 TRAV8-6A0A0B4J262 113 aa14.31□□□□□ -0.12
ITGA4-207ENST00000476089 K7EIL1 84 aa14.31□□□□□ -0.12
ITGA4-207ENST00000476089 C12orf74Q32Q52 190 aa14.31□□□□□ -0.12
ITGA4-207ENST00000476089 ANK2Q01484 3957 aa14.31□□□□□ -0.12
ITGA4-207ENST00000476089 ZNF25P17030 456 aaPredicted RBP14.31□□□□□ -0.12
ITGA4-207ENST00000476089 SPATA25Q9BR10 227 aa14.31□□□□□ -0.12
ITGA4-207ENST00000476089 SIVA1O15304 175 aa14.3□□□□□ -0.12
ITGA4-207ENST00000476089 LBHQ53QV2 105 aaPredicted RBP14.3□□□□□ -0.12
ITGA4-207ENST00000476089 A0A096LPF7 62 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 GAGE6Q13070 117 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 BATFQ16520 125 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 TINCRA0A1B0GVN0 87 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 EREGO14944 169 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 ZNF22P17026 224 aaPredicted RBP14.29□□□□□ -0.12
ITGA4-207ENST00000476089 MRPL23Q16540 153 aaKnown RBP14.29□□□□□ -0.12
ITGA4-207ENST00000476089 TTTY13Q9BZ97 58 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 CDC42SE2Q9NRR3 84 aa14.29□□□□□ -0.12
ITGA4-207ENST00000476089 NOTCH1P46531 2555 aa14.28□□□□□ -0.12
ITGA4-207ENST00000476089 A0A0J9YWU9 116 aa14.28□□□□□ -0.12
ITGA4-207ENST00000476089 C2orf91Q6ZV80 131 aa14.28□□□□□ -0.12
ITGA4-207ENST00000476089 SH2D6Q7Z4S9 175 aa14.28□□□□□ -0.12
ITGA4-207ENST00000476089 GEMIN7Q9H840 131 aaKnown RBP14.28□□□□□ -0.12
ITGA4-207ENST00000476089 UBE2D1P51668 147 aa14.27□□□□□ -0.12
ITGA4-207ENST00000476089 ICOSQ9Y6W8 199 aa14.27□□□□□ -0.12
ITGA4-207ENST00000476089 MRAPQ8TCY5 172 aa14.27□□□□□ -0.13
ITGA4-207ENST00000476089 TMEM223A0PJW6 202 aa14.26□□□□□ -0.13
ITGA4-207ENST00000476089 HINT1P49773 126 aaPredicted RBP14.26□□□□□ -0.13
ITGA4-207ENST00000476089 SEC11AP67812 179 aa14.26□□□□□ -0.13
ITGA4-207ENST00000476089 DNAH3Q8TD57 4116 aa14.25□□□□□ -0.13
ITGA4-207ENST00000476089 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
ITGA4-207ENST00000476089 MAPKAPK5-AS1Q8N8E1 139 aa14.25□□□□□ -0.13
ITGA4-207ENST00000476089 TM2D3Q9BRN9 247 aa14.25□□□□□ -0.13
ITGA4-207ENST00000476089 TMEM262E9PQX1 116 aa14.24□□□□□ -0.13
ITGA4-207ENST00000476089 MPV17L2Q567V2 206 aa14.24□□□□□ -0.13
ITGA4-207ENST00000476089 C11orf45Q8TAV5 145 aa14.24□□□□□ -0.13
ITGA4-207ENST00000476089 TRAV13-1A0A0B4J241 112 aa14.23□□□□□ -0.13
ITGA4-207ENST00000476089 TIRAPP58753 221 aa14.23□□□□□ -0.13
ITGA4-207ENST00000476089 Q6ZTC4 211 aa14.23□□□□□ -0.13
ITGA4-207ENST00000476089 LINC00469Q8N7U9 141 aa14.23□□□□□ -0.13
ITGA4-207ENST00000476089 HIGD1BQ9P298 99 aa14.23□□□□□ -0.13
ITGA4-207ENST00000476089 HERVK_113P63121 156 aa14.22□□□□□ -0.13
ITGA4-207ENST00000476089 LEPROTO15243 131 aa14.22□□□□□ -0.13
ITGA4-207ENST00000476089 LGALS3P17931 250 aaKnown RBP14.22□□□□□ -0.13
ITGA4-207ENST00000476089 ZNF815PA8K554 130 aa14.21□□□□□ -0.13
ITGA4-207ENST00000476089 H3BNG1 76 aa14.21□□□□□ -0.13
ITGA4-207ENST00000476089 H3BRM9 83 aa14.21□□□□□ -0.13
ITGA4-207ENST00000476089 NBEAL1Q6ZS30 2694 aa14.21□□□□□ -0.14
ITGA4-207ENST00000476089 J3QQQ9 107 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 FAM19A3Q7Z5A8 133 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 PLEKHB2Q96CS7 222 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 IGLV4-60A0A075B6I1 120 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 HSD52Q0P140 79 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 LINC00242Q5T6M2 205 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 MGAM2Q2M2H8 2515 aa14.2□□□□□ -0.14
ITGA4-207ENST00000476089 IGHV3-64A0A075B6Q5 118 aa14.19□□□□□ -0.14
ITGA4-207ENST00000476089 A0A1B0GUV1 79 aa14.19□□□□□ -0.14
ITGA4-207ENST00000476089 NANOS2P60321 138 aaKnown RBP14.19□□□□□ -0.14
ITGA4-207ENST00000476089 COL5A1-AS1Q5SY13 56 aa14.19□□□□□ -0.14
ITGA4-207ENST00000476089 BVES-AS1Q5T3Y7 98 aa14.18□□□□□ -0.14
ITGA4-207ENST00000476089 IGLV5-45A0A087WSX0 123 aa14.18□□□□□ -0.14
ITGA4-207ENST00000476089 SCGB1D4Q6XE38 83 aa14.18□□□□□ -0.14
ITGA4-207ENST00000476089 CDKN2A-AS1Q9UH64 79 aa14.18□□□□□ -0.14
ITGA4-207ENST00000476089 RBX1P62877 108 aa14.17□□□□□ -0.14
ITGA4-207ENST00000476089 LELP1Q5T871 98 aa14.17□□□□□ -0.14
ITGA4-207ENST00000476089 DEFB131BA0A096LNP1 70 aa14.16□□□□□ -0.14
ITGA4-207ENST00000476089 IGHV1-58A0A0C4DH39 117 aa14.16□□□□□ -0.14
ITGA4-207ENST00000476089 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
ITGA4-207ENST00000476089 TSPEAR-AS2P59090 65 aa14.16□□□□□ -0.14
ITGA4-207ENST00000476089 COX6A2Q02221 97 aa14.16□□□□□ -0.14
ITGA4-207ENST00000476089 LURAP1LQ8IV03 231 aa14.16□□□□□ -0.14
ITGA4-207ENST00000476089 SPINK8P0C7L1 97 aa14.15□□□□□ -0.14
ITGA4-207ENST00000476089 IGHV3-30-3P0DP02 117 aa14.15□□□□□ -0.14
ITGA4-207ENST00000476089 TRAV8-3A0A0A6YYJ7 113 aa14.14□□□□□ -0.15
ITGA4-207ENST00000476089 TAL2Q16559 108 aa14.12□□□□□ -0.15
ITGA4-207ENST00000476089 LYPD5Q6UWN5 251 aa14.12□□□□□ -0.15
ITGA4-207ENST00000476089 ORAOV1Q8WV07 137 aa14.11□□□□□ -0.15
ITGA4-207ENST00000476089 HIST1H4GQ99525 98 aa14.11□□□□□ -0.15
ITGA4-207ENST00000476089 TENM3Q9P273 2699 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms