RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, human

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSAMP-204	ENST00000475403	UBE2W	Q96B02	151 aa		4.93	□□□□□ -1.62
LSAMP-204	ENST00000475403	LINC00526	Q96FQ7	95 aa		4.93	□□□□□ -1.62
LSAMP-204	ENST00000475403	AAMDC	Q9H7C9	122 aa		4.93	□□□□□ -1.62
LSAMP-204	ENST00000475403	AGRN	O00468	2067 aa		4.93	□□□□□ -1.62
LSAMP-204	ENST00000475403	TRAV8-1	A0A0A6YYK1	113 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	TRAV2	A0A0B4J234	112 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	EPM2A	B3EWF7	344 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403		H3BRN7	92 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	SH2D1A	O60880	128 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	RBMY1A1	P0DJD3	496 aa	Known RBP	4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	ORM2	P19652	201 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	HERVK_113	P61574	105 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	MRGPRG-AS1	Q2M3A8	158 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	ODF3L2	Q3SX64	289 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	VMA21	Q3ZAQ7	101 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	ORMDL2	Q53FV1	153 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	CLEC19A	Q6UXS0	136 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403		Q6ZTC4	211 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	EEF1AKMT3	Q96AZ1	226 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	SGK494	Q96LW2	274 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	PRADC1	Q9BSG0	188 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	C21orf62	Q9NYP8	219 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	PRO1854	Q9UHT4	67 aa		4.92	□□□□□ -1.62
LSAMP-204	ENST00000475403	DEFB131B	A0A096LNP1	70 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	CGB1	A6NKQ9	187 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	ZNF815P	A8K554	130 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403		C9JAW5	83 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	SCGB2A1	O75556	95 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	IGHV3-30	P01768	117 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	INAFM2	P0DMQ5	153 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	IGHV3-30-5	P0DP03	117 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	CRYGA	P11844	174 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	CXCL5	P42830	114 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	WT1-AS	Q06250	92 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	MLANA	Q16655	118 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	LINC01620	Q4KN68	170 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	C9orf153	Q5TBE3	101 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	ZFP2	Q6ZN57	461 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	APRG1	Q8IVJ8	170 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	NEXN-AS1	Q8NBZ9	246 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	NTN5	Q8WTR8	489 aa	Predicted RBP	4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	SRSF8	Q9BRL6	282 aa	Known RBP	4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403	SHANK2-AS3	Q9BTD1	123 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403		S4R3C0	116 aa		4.91	□□□□□ -1.62
LSAMP-204	ENST00000475403		A0A0J9YY99	117 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	TRBV30	A0A0K0K1B3	111 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403		H3BVH4	76 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	MRPS12	O15235	138 aa	Known RBP	4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	IGLV2-23	P01705	113 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	IGHV3-33	P01772	117 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	LINC00694	P0DN24	101 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	SCGB1D4	Q6XE38	83 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403		Q6ZQT7	251 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	SLC25A29	Q8N8R3	303 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	TOMM6	Q96B49	74 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	CCDC140	Q96MF4	163 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	LRP1B	Q9NZR2	4599 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	UBR4	Q5T4S7	5183 aa		4.9	□□□□□ -1.63
LSAMP-204	ENST00000475403	IGHV4-28	A0A0C4DH34	117 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	IGHV3-35	A0A0C4DH35	117 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403		A0A0J9YX75	114 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403		A4D1N5	150 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	SMKR1	H3BMG3	65 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	CFC1B	P0CG36	223 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	CFC1	P0CG37	223 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	MIF	P14174	115 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	CMC4	P56277	68 aa	Predicted RBP	4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	FXYD7	P58549	80 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	TMEM258	P61165	79 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	UNQ9165/PRO28630	Q6UXU0	137 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	EXOC3-AS1	Q8N2X6	119 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	NRAC	Q8N912	160 aa		4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	DAZ1	Q9NQZ3	744 aa	Known RBP	4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	MRPL36	Q9P0J6	103 aa	Known RBP	4.89	□□□□□ -1.63
LSAMP-204	ENST00000475403	TRBV7-1	A0A0A6YYK4	115 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	C11orf86	A6NJI1	115 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403		M0R381	172 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	CRYGD	P07320	174 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	COX7C	P15954	63 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	HERVK_113	P63121	156 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	TNP2	Q05952	138 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	ERCC8	Q13216	396 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	ANXA2R	Q3ZCQ2	193 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	C10orf55	Q5SWW7	151 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	SDIM1	Q6ZPB5	146 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403		Q6ZR54	194 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	LINC00643	Q86TS7	51 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403		Q8NAQ8	132 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	TMEM263	Q8WUH6	116 aa	Known RBP	4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	SLC50A1	Q9BRV3	221 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	SMIM2	Q9BVW6	85 aa		4.88	□□□□□ -1.63
LSAMP-204	ENST00000475403	APOB	P04114	4563 aa	Known RBP	4.87	□□□□□ -1.63
LSAMP-204	ENST00000475403	IGKV3-7	A0A075B6H7	116 aa		4.87	□□□□□ -1.63
LSAMP-204	ENST00000475403	TMSB15B	A0A087X1C1	80 aa		4.87	□□□□□ -1.63
LSAMP-204	ENST00000475403		J3QL48	77 aa		4.87	□□□□□ -1.63
LSAMP-204	ENST00000475403	ATOX1	O00244	68 aa		4.87	□□□□□ -1.63
LSAMP-204	ENST00000475403	PPP1R17	O96001	155 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms