RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ENHOQ6UWT2 76 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 Q6ZTC4 211 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 RPL36ALQ969Q0 106 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 LITAFQ99732 161 aa4.26□□□□□ -1.73
ECHDC1-215ENST00000475319 FLNBO75369 2602 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 DMDP11532 3685 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 IGHV4-4A0A075B6R2 117 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 TRAV12-3A0A0B4J271 114 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 H0Y9J4 135 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 IGHV1-69P01742 117 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 CLPSP04118 112 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 LINC00313P59037 77 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 C17orf82Q86X59 251 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 LINC01560Q8TB33 94 aa4.25□□□□□ -1.73
ECHDC1-215ENST00000475319 SPTY2D1-AS1A0A0U1RR47 76 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 KLLNB2CW77 178 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 C12orf77C9JDV5 145 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 LHBP01229 141 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 PRB1P04280 392 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 SAA1P0DJI8 122 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 C14orf132Q9NPU4 83 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 COL6A6A6NMZ7 2263 aa4.24□□□□□ -1.73
ECHDC1-215ENST00000475319 DSPP15924 2871 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 PTPRQQ9UMZ3 2332 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 IGKV1D-37A0A075B6S9 117 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 TSHBP01222 138 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 IGHV4-38-2P0DP08 117 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 C15orf32Q32M92 178 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 MRPL36Q9P0J6 103 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 SPTA1P02549 2419 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 IGSF10Q6WRI0 2623 aa4.23□□□□□ -1.73
ECHDC1-215ENST00000475319 DNAH14Q0VDD8 3507 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 SPTBP11277 2137 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 HELZ2Q9BYK8 2649 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 C16orf90A8MZG2 172 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 H0YGG7 62 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 H0YGX0 51 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 GNRH2O43555 120 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 GAS8-AS1O95177 125 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 DEFB133Q30KQ1 61 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 AKAP13Q12802 2813 aa4.22□□□□□ -1.73
ECHDC1-215ENST00000475319 A0A087X002 238 aa4.21□□□□□ -1.73
ECHDC1-215ENST00000475319 HCG22E2RYF7 251 aa4.21□□□□□ -1.73
ECHDC1-215ENST00000475319 PSPHP1O15172 72 aa4.21□□□□□ -1.73
ECHDC1-215ENST00000475319 NREPQ16612 68 aa4.21□□□□□ -1.73
ECHDC1-215ENST00000475319 ATP1A1-AS1Q5TC04 95 aa4.21□□□□□ -1.73
ECHDC1-215ENST00000475319 ITLN2Q8WWU7 325 aaPredicted RBP4.21□□□□□ -1.73
ECHDC1-215ENST00000475319 GCN1Q92616 2671 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 CACNA1CQ13936 2221 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 EML6Q6ZMW3 1958 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 CFAP47Q6ZTR5 3102 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV4-61A0A0C4DH41 118 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV4-59P01825 116 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 PATE4P0C8F1 98 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 Q5VV11 94 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
ECHDC1-215ENST00000475319 ZNF462Q96JM2 2506 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV3-9P01782 118 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 TRGV3P03979 118 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 PRM2P04554 102 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV3-30-3P0DP02 117 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 CCL4L1Q8NHW4 92 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 FGF23Q9GZV9 251 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 KIF25-AS1Q9Y6Z4 181 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 FRYQ5TBA9 3013 aa4.2□□□□□ -1.74
ECHDC1-215ENST00000475319 POLEQ07864 2286 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 MUC22E2RYF6 1773 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 C10orf142B7Z368 130 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 PRAC2D3DTV9 90 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 CHKB-CPT1BH3BT56 60 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 IGKV3-11P04433 115 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 FLVCR1-AS1Q8TAF5 88 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 NDUFA4L2Q9NRX3 87 aa4.19□□□□□ -1.74
ECHDC1-215ENST00000475319 TRAV10A0A0B4J240 114 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 PSCAO43653 123 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 CTSGP08311 255 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 ZNF32P17041 273 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 ORMDL1Q9P0S3 153 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 AHCTF1Q8WYP5 2266 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 ITPR1Q14643 2758 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 NAV2Q8IVL1 2488 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 MYO18BQ8IUG5 2567 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 DMXL2Q8TDJ6 3036 aa4.18□□□□□ -1.74
ECHDC1-215ENST00000475319 SETXQ7Z333 2677 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 TRAV21A0A0B4J279 112 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 IGHV1-18A0A0C4DH31 117 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 H3BRN7 92 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 FBXL19-AS1Q494R0 122 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 C11orf72Q8NBR9 251 aa4.17□□□□□ -1.74
ECHDC1-215ENST00000475319 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms