RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 C9orf118A6NHY6 69 aa15.43■□□□□ 0.06
CCM2-206ENST00000474617 LINC00694P0DN24 101 aa15.43■□□□□ 0.06
CCM2-206ENST00000474617 MIFP14174 115 aa15.43■□□□□ 0.06
CCM2-206ENST00000474617 Q6ZUT4 128 aa15.43■□□□□ 0.06
CCM2-206ENST00000474617 TMEM101Q96IK0 257 aa15.43■□□□□ 0.06
CCM2-206ENST00000474617 UBE2L6O14933 153 aa15.42■□□□□ 0.06
CCM2-206ENST00000474617 UBE2D1P51668 147 aa15.42■□□□□ 0.06
CCM2-206ENST00000474617 GEMIN7Q9H840 131 aaKnown RBP15.42■□□□□ 0.06
CCM2-206ENST00000474617 TEP1Q99973 2627 aaKnown RBP15.42■□□□□ 0.06
CCM2-206ENST00000474617 F8P00451 2351 aa15.41■□□□□ 0.06
CCM2-206ENST00000474617 IGLV5-45A0A087WSX0 123 aa15.41■□□□□ 0.06
CCM2-206ENST00000474617 HERVK_113P63121 156 aa15.41■□□□□ 0.06
CCM2-206ENST00000474617 VAMP3Q15836 100 aa15.41■□□□□ 0.06
CCM2-206ENST00000474617 SHISA2Q6UWI4 295 aa15.41■□□□□ 0.06
CCM2-206ENST00000474617 OR5A1Q8NGJ0 315 aa15.41■□□□□ 0.06
CCM2-206ENST00000474617 NTM-AS1Q6ZSK4 140 aa15.4■□□□□ 0.06
CCM2-206ENST00000474617 SPATA3Q8NHX4 192 aa15.4■□□□□ 0.06
CCM2-206ENST00000474617 IGHV1-58A0A0C4DH39 117 aa15.39■□□□□ 0.05
CCM2-206ENST00000474617 FXYD2P54710 66 aa15.39■□□□□ 0.05
CCM2-206ENST00000474617 CEMP1Q6PRD7 247 aaPredicted RBP15.39■□□□□ 0.05
CCM2-206ENST00000474617 A0A0J9YY99 117 aa15.38■□□□□ 0.05
CCM2-206ENST00000474617 TEX48A0A1B0GUV7 120 aa15.38■□□□□ 0.05
CCM2-206ENST00000474617 AMMECR1LQ6DCA0 310 aa15.38■□□□□ 0.05
CCM2-206ENST00000474617 PRO0255Q9UI72 69 aa15.38■□□□□ 0.05
CCM2-206ENST00000474617 NOTCH3Q9UM47 2321 aa15.38■□□□□ 0.05
CCM2-206ENST00000474617 A0A1B0GWB2 263 aa15.37■□□□□ 0.05
CCM2-206ENST00000474617 DEFB130BP0DP73 79 aa15.37■□□□□ 0.05
CCM2-206ENST00000474617 DEFB130AP0DP74 79 aa15.37■□□□□ 0.05
CCM2-206ENST00000474617 SRSF9Q13242 221 aaKnown RBP eCLIP15.37■□□□□ 0.05
CCM2-206ENST00000474617 CDC42SE2Q9NRR3 84 aa15.37■□□□□ 0.05
CCM2-206ENST00000474617 ATRQ13535 2644 aa15.37■□□□□ 0.05
CCM2-206ENST00000474617 TRBV6-8A0A0A6YYG3 113 aa15.36■□□□□ 0.05
CCM2-206ENST00000474617 A8MZ25 164 aa15.36■□□□□ 0.05
CCM2-206ENST00000474617 RNF183Q96D59 192 aa15.36■□□□□ 0.05
CCM2-206ENST00000474617 IGHV3-30-3P0DP02 117 aa15.35■□□□□ 0.05
CCM2-206ENST00000474617 TSPEAR-AS2P59090 65 aa15.35■□□□□ 0.05
CCM2-206ENST00000474617 KRTAP24-1Q3LI83 254 aa15.35■□□□□ 0.05
CCM2-206ENST00000474617 GTF2H5Q6ZYL4 71 aa15.35■□□□□ 0.05
CCM2-206ENST00000474617 VSIG2Q96IQ7 327 aa15.35■□□□□ 0.05
CCM2-206ENST00000474617 TMEM238C9JI98 176 aa15.34■□□□□ 0.05
CCM2-206ENST00000474617 DEFB135Q30KP9 77 aa15.34■□□□□ 0.05
CCM2-206ENST00000474617 FAM222AQ5U5X8 452 aa15.34■□□□□ 0.05
CCM2-206ENST00000474617 C3orf56Q8N813 242 aa15.34■□□□□ 0.05
CCM2-206ENST00000474617 IGHV4-30-4P0DP06 118 aa15.33■□□□□ 0.05
CCM2-206ENST00000474617 NHP2Q9NX24 153 aaKnown RBP15.33■□□□□ 0.05
CCM2-206ENST00000474617 TENM1Q9UKZ4 2725 aa15.33■□□□□ 0.04
CCM2-206ENST00000474617 Q6ZVH6 145 aa15.33■□□□□ 0.04
CCM2-206ENST00000474617 EGFEM1PQ0D2K5 195 aa15.32■□□□□ 0.04
CCM2-206ENST00000474617 C12orf74Q32Q52 190 aa15.32■□□□□ 0.04
CCM2-206ENST00000474617 IGHV4-28A0A0C4DH34 117 aa15.31■□□□□ 0.04
CCM2-206ENST00000474617 SPART-AS1P0CW21 52 aa15.31■□□□□ 0.04
CCM2-206ENST00000474617 RNASE13Q5GAN3 156 aaKnown RBP15.31■□□□□ 0.04
CCM2-206ENST00000474617 ATP6V0E2Q8NHE4 81 aa15.31■□□□□ 0.04
CCM2-206ENST00000474617 VWFP04275 2813 aa15.3■□□□□ 0.04
CCM2-206ENST00000474617 A0A1W2PPM0 123 aa15.3■□□□□ 0.04
CCM2-206ENST00000474617 FABP2P12104 132 aa15.3■□□□□ 0.04
CCM2-206ENST00000474617 Q8NAQ8 132 aa15.3■□□□□ 0.04
CCM2-206ENST00000474617 TRAV26-1A0A087WT03 109 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 LOC100131303A0A0U1RQF7 123 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 H3BUT2 72 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 DAD1P61803 113 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 LINC00242Q5T6M2 205 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 ZFAND6Q6FIF0 208 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 SH2D6Q7Z4S9 175 aa15.29■□□□□ 0.04
CCM2-206ENST00000474617 CYSRT1A8MQ03 144 aa15.28■□□□□ 0.04
CCM2-206ENST00000474617 TIMM17BO60830 172 aa15.28■□□□□ 0.04
CCM2-206ENST00000474617 GYPEP15421 78 aa15.28■□□□□ 0.04
CCM2-206ENST00000474617 SAMD5Q5TGI4 173 aa15.28■□□□□ 0.04
CCM2-206ENST00000474617 IGLV5-39A0A0G2JS06 123 aa15.27■□□□□ 0.04
CCM2-206ENST00000474617 GAGE10A6NGK3 116 aa15.27■□□□□ 0.04
CCM2-206ENST00000474617 CCL25O15444 150 aa15.27■□□□□ 0.04
CCM2-206ENST00000474617 IGHV3-30P01768 117 aa15.27■□□□□ 0.04
CCM2-206ENST00000474617 ATP5G1P05496 136 aa15.27■□□□□ 0.04
CCM2-206ENST00000474617 IGHV3-30-5P0DP03 117 aa15.27■□□□□ 0.04
CCM2-206ENST00000474617 PAX4O43316 350 aa15.27■□□□□ 0.03
CCM2-206ENST00000474617 RAB37Q96AX2 223 aa15.27■□□□□ 0.03
CCM2-206ENST00000474617 CDKN2A-AS1Q9UH64 79 aa15.27■□□□□ 0.03
CCM2-206ENST00000474617 NDUFA12Q9UI09 145 aa15.27■□□□□ 0.03
CCM2-206ENST00000474617 RPL24P83731 157 aaKnown RBP15.26■□□□□ 0.03
CCM2-206ENST00000474617 CHCHD5Q9BSY4 110 aa15.26■□□□□ 0.03
CCM2-206ENST00000474617 A0A0J9YXY3 114 aa15.25■□□□□ 0.03
CCM2-206ENST00000474617 A0A1B0GUV1 79 aa15.25■□□□□ 0.03
CCM2-206ENST00000474617 K7EP13 123 aa15.25■□□□□ 0.03
CCM2-206ENST00000474617 K7EP34 96 aa15.25■□□□□ 0.03
CCM2-206ENST00000474617 NDUFA1O15239 70 aa15.24■□□□□ 0.03
CCM2-206ENST00000474617 IGHV3-64A0A075B6Q5 118 aa15.23■□□□□ 0.03
CCM2-206ENST00000474617 SPINK8P0C7L1 97 aa15.23■□□□□ 0.03
CCM2-206ENST00000474617 C10orf126Q8N4M7 172 aa15.23■□□□□ 0.03
CCM2-206ENST00000474617 SPANXDQ9BXN6 97 aa15.23■□□□□ 0.03
CCM2-206ENST00000474617 SPANXCQ9NY87 97 aa15.23■□□□□ 0.03
CCM2-206ENST00000474617 TRAV8-3A0A0A6YYJ7 113 aa15.22■□□□□ 0.03
CCM2-206ENST00000474617 TRAV13-1A0A0B4J241 112 aa15.22■□□□□ 0.03
CCM2-206ENST00000474617 IGLL5B9A064 214 aa15.22■□□□□ 0.03
CCM2-206ENST00000474617 COPS9Q8WXC6 57 aa15.22■□□□□ 0.03
CCM2-206ENST00000474617 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.22■□□□□ 0.03
CCM2-206ENST00000474617 CIRBPQ14011 172 aaKnown RBP15.22■□□□□ 0.03
CCM2-206ENST00000474617 LYRM7Q5U5X0 104 aa15.22■□□□□ 0.03
CCM2-206ENST00000474617 K7ERJ3 54 aa15.21■□□□□ 0.03
CCM2-206ENST00000474617 GAGE6Q13070 117 aa15.21■□□□□ 0.03
CCM2-206ENST00000474617 SPCS1Q9Y6A9 102 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms