RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 VCX2Q9H322 139 aa7.15□□□□□ -1.26
COL12A1-206ENST00000474564 MRPS16Q9Y3D3 137 aaKnown RBP7.15□□□□□ -1.26
COL12A1-206ENST00000474564 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
COL12A1-206ENST00000474564 PYGO1Q9Y3Y4 419 aa7.15□□□□□ -1.26
COL12A1-206ENST00000474564 CSDC2Q9Y534 153 aaKnown RBP7.15□□□□□ -1.26
COL12A1-206ENST00000474564 A0A1B0GUV1 79 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 K7EP13 123 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 DPM2O94777 84 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 IGKCP01834 107 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 LINC01545Q5VT33 79 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 CDPF1Q6NVV7 123 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 TEX43Q6ZNM6 134 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 MRPL52Q86TS9 123 aaKnown RBP7.14□□□□□ -1.27
COL12A1-206ENST00000474564 PRO1933Q9H354 126 aa7.14□□□□□ -1.27
COL12A1-206ENST00000474564 SIVA1O15304 175 aa7.13□□□□□ -1.27
COL12A1-206ENST00000474564 PLNP26678 52 aa7.13□□□□□ -1.27
COL12A1-206ENST00000474564 PMVKQ15126 192 aa7.13□□□□□ -1.27
COL12A1-206ENST00000474564 SPATA12Q7Z6I5 190 aa7.13□□□□□ -1.27
COL12A1-206ENST00000474564 C10orf126Q8N4M7 172 aa7.13□□□□□ -1.27
COL12A1-206ENST00000474564 BAALCQ8WXS3 180 aa7.13□□□□□ -1.27
COL12A1-206ENST00000474564 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 TRAV12-1A0A0B4J245 112 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 F8VRH5 84 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 CRPP02741 224 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 ANGP03950 147 aaKnown RBP7.12□□□□□ -1.27
COL12A1-206ENST00000474564 HERVK_113P61574 105 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
COL12A1-206ENST00000474564 ZNF664Q8N3J9 261 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 UPK3BQ9BT76 320 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 UBE2D4Q9Y2X8 147 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
COL12A1-206ENST00000474564 hDV102S1A0JD36 115 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 CCL25O15444 150 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 RBX1P62877 108 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 SEC11AP67812 179 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 ODF1Q14990 250 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 CASC10Q5T4H9 136 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 Q8N976 141 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 Q9H8V8 135 aa7.11□□□□□ -1.27
COL12A1-206ENST00000474564 PRSS29PA6NIE9 313 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 IGIPA6NJ69 53 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 IGHV3-30P01768 117 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 IGHV3-33P01772 117 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 IGHV3-30-5P0DP03 117 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 SS18Q15532 418 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 TTC32Q5I0X7 151 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 LINC01556Q5JQF7 62 aa7.1□□□□□ -1.27
COL12A1-206ENST00000474564 MRPL35Q9NZE8 188 aaKnown RBP7.1□□□□□ -1.27
COL12A1-206ENST00000474564 MEGF8Q7Z7M0 2845 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 DNAH10OSP0CZ25 163 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 MPV17L2Q567V2 206 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 RNASE13Q5GAN3 156 aaKnown RBP7.09□□□□□ -1.27
COL12A1-206ENST00000474564 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 RMI2Q96E14 147 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 CDC42SE2Q9NRR3 84 aa7.09□□□□□ -1.27
COL12A1-206ENST00000474564 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 TRAV8-3A0A0A6YYJ7 113 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 NMUP48645 174 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 ZC2HC1BQ5TFG8 222 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 Q6ZUT4 128 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
COL12A1-206ENST00000474564 CHAC1Q9BUX1 264 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
COL12A1-206ENST00000474564 KLK12Q9UKR0 248 aa7.08□□□□□ -1.28
COL12A1-206ENST00000474564 TRAV8-4A0A0B4J246 113 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 IGKV3OR2-268A0A0C4DH90 116 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 REG3AQ06141 175 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 MIAQ16674 131 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 MAJINQ3KP22 176 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 LINC00269Q8N2A0 174 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 UQCR10Q9UDW1 63 aa7.07□□□□□ -1.28
COL12A1-206ENST00000474564 IGLV4-60A0A075B6I1 120 aa7.06□□□□□ -1.28
COL12A1-206ENST00000474564 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
COL12A1-206ENST00000474564 LY6G6CO95867 125 aa7.06□□□□□ -1.28
COL12A1-206ENST00000474564 HNRNPA3P51991 378 aaKnown RBP7.06□□□□□ -1.28
COL12A1-206ENST00000474564 UBE2WQ96B02 151 aa7.06□□□□□ -1.28
COL12A1-206ENST00000474564 COX11Q9Y6N1 276 aa7.06□□□□□ -1.28
COL12A1-206ENST00000474564 DNHD1Q96M86 4753 aa7.06□□□□□ -1.28
COL12A1-206ENST00000474564 H3BRM9 83 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 HERVK_113P63121 156 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 NFE4Q86UQ8 179 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 STPG4Q8N801 248 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 AMELXQ99217 191 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 TM2D2Q9BX73 214 aa7.05□□□□□ -1.28
COL12A1-206ENST00000474564 TENM3Q9P273 2699 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 A0A0J9YXV3 536 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 LINC00959A0A1B0GUT2 108 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 C11orf86A6NJI1 115 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 DDTP30046 118 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 MIEN1Q9BRT3 115 aa7.04□□□□□ -1.28
COL12A1-206ENST00000474564 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
COL12A1-206ENST00000474564 IBA57-AS1B1ANH7 110 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms