RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 EFNA2O43921 213 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 BAALC-AS2P0C853 105 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 Q0VFX4 171 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 ZNF876PQ49A33 203 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 EEF1AKMT3Q96AZ1 226 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 SMR3AQ99954 134 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 PRRC2AP48634 2157 aaKnown RBP5.33□□□□□ -1.56
GPNMB-209ENST00000474157 DOCK10Q96BY6 2186 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 TRAV8-3A0A0A6YYJ7 113 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 SMKR1H3BMG3 65 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 I3L3M4 83 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 K7EMT4 169 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 M0R378 163 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 M0R381 172 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 CLPSP04118 112 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 ECSCRQ19T08 205 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 PATE2Q6UY27 113 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 Q6ZVQ6 151 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 OBSCN-AS1Q96MR7 158 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 SMIM2Q9BVW6 85 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 PROK2Q9HC23 129 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 EML6Q6ZMW3 1958 aa5.32□□□□□ -1.56
GPNMB-209ENST00000474157 RAI1Q7Z5J4 1906 aaPredicted RBP5.32□□□□□ -1.56
GPNMB-209ENST00000474157 ABCA4P78363 2273 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 RTTNQ86VV8 2226 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 IGKV1OR2-108A0A075B7D4 117 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 J3QT63 122 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 FXYD7P58549 80 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 SPINK9Q5DT21 86 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 FAM53AQ6NSI3 398 aaPredicted RBP5.31□□□□□ -1.56
GPNMB-209ENST00000474157 C6orf223Q8N319 242 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 C11orf45Q8TAV5 145 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 ZNF524Q96C55 264 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 AMELXQ99217 191 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
GPNMB-209ENST00000474157 C11orf68Q9H3H3 251 aaKnown RBP5.31□□□□□ -1.56
GPNMB-209ENST00000474157 SS18Q15532 418 aa5.3□□□□□ -1.56
GPNMB-209ENST00000474157 TMEM30BQ3MIR4 351 aa5.3□□□□□ -1.56
GPNMB-209ENST00000474157 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
GPNMB-209ENST00000474157 LCA10Q71F78 164 aa5.3□□□□□ -1.56
GPNMB-209ENST00000474157 KLHL30-AS1Q8NEE0 82 aa5.3□□□□□ -1.56
GPNMB-209ENST00000474157 LINC00588Q9Y4M8 146 aa5.3□□□□□ -1.56
GPNMB-209ENST00000474157 C8orf87E5RJ46 101 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 F8WEM9 126 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 H7C2G1 150 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 SOCS3O14543 225 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 IGKV3-11P04433 115 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 MIFP14174 115 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 CRIP1P50238 77 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 CXCL6P80162 114 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 KLF14Q8TD94 323 aaPredicted RBP5.29□□□□□ -1.56
GPNMB-209ENST00000474157 ESM1Q9NQ30 184 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
GPNMB-209ENST00000474157 HEATR1Q9H583 2144 aaKnown RBP5.29□□□□□ -1.56
GPNMB-209ENST00000474157 E7EQL1 145 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 VCYO14598 125 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 LY6G6DO95868 133 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 CD28P10747 220 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 MIAQ16674 131 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 C2orf66Q6UXQ4 117 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 ZNF575Q86XF7 245 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 TMEM61Q8N0U2 210 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 SPRR3Q9UBC9 169 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 CACNA1CQ13936 2221 aa5.28□□□□□ -1.56
GPNMB-209ENST00000474157 IGLV4-69A0A075B6H9 119 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 IGKV3D-7A0A0C4DH55 119 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 C12orf77C9JDV5 145 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 SPRY3O43610 288 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 ZNF73O43830 326 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-209ENST00000474157 IGHV1-69P01742 117 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 NNATQ16517 81 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 OPRPNQ99935 248 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-209ENST00000474157 PHLDA3Q9Y5J5 127 aa5.27□□□□□ -1.57
GPNMB-209ENST00000474157 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
GPNMB-209ENST00000474157 MAP1AP78559 2803 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-209ENST00000474157 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-209ENST00000474157 INAFM1C9JVW0 142 aa5.26□□□□□ -1.57
GPNMB-209ENST00000474157 H0YGX0 51 aa5.26□□□□□ -1.57
GPNMB-209ENST00000474157 CIRBPQ14011 172 aaKnown RBP5.26□□□□□ -1.57
GPNMB-209ENST00000474157 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-209ENST00000474157 CLEC2BQ92478 149 aa5.26□□□□□ -1.57
GPNMB-209ENST00000474157 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
GPNMB-209ENST00000474157 CTSZQ9UBR2 303 aa5.26□□□□□ -1.57
GPNMB-209ENST00000474157 IGHV4-28A0A0C4DH34 117 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 UBE2AP49459 152 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 RUSC1-AS1Q66K80 236 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 MYO7BQ6PIF6 2116 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 PRR26Q8N8Z3 221 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 UBL5Q9BZL1 73 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 LINC00846Q9NV44 126 aa5.25□□□□□ -1.57
GPNMB-209ENST00000474157 CNTRLQ7Z7A1 2325 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 IGKV1D-37A0A075B6S9 117 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 A0A087X002 238 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 E7EUB6 86 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 ZNF32P17041 273 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
GPNMB-209ENST00000474157 UNQ9165/PRO28630Q6UXU0 137 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 C14orf178Q8N769 122 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms