RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 RBX1P62877 108 aa12.94□□□□□ -0.34
SNX4-203ENST00000471751 PMCHL1Q16048 86 aa12.94□□□□□ -0.34
SNX4-203ENST00000471751 Q6ZN92 141 aa12.94□□□□□ -0.34
SNX4-203ENST00000471751 Q9H8V8 135 aa12.94□□□□□ -0.34
SNX4-203ENST00000471751 TMA7Q9Y2S6 64 aaKnown RBP12.94□□□□□ -0.34
SNX4-203ENST00000471751 WFDC10BQ8IUB3 73 aa12.93□□□□□ -0.34
SNX4-203ENST00000471751 ZNF664Q8N3J9 261 aa12.93□□□□□ -0.34
SNX4-203ENST00000471751 IFI27L1Q96BM0 104 aa12.93□□□□□ -0.34
SNX4-203ENST00000471751 MPV17L2Q567V2 206 aa12.92□□□□□ -0.34
SNX4-203ENST00000471751 VCX2Q9H322 139 aa12.92□□□□□ -0.34
SNX4-203ENST00000471751 IGLV4-3A0A075B6K6 122 aa12.91□□□□□ -0.34
SNX4-203ENST00000471751 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
SNX4-203ENST00000471751 AMELXQ99217 191 aa12.91□□□□□ -0.34
SNX4-203ENST00000471751 HIST1H2BLQ99880 126 aa12.91□□□□□ -0.34
SNX4-203ENST00000471751 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
SNX4-203ENST00000471751 TRAV12-1A0A0B4J245 112 aa12.9□□□□□ -0.34
SNX4-203ENST00000471751 AKR1D1P51857 326 aa12.9□□□□□ -0.34
SNX4-203ENST00000471751 TEX43Q6ZNM6 134 aa12.9□□□□□ -0.34
SNX4-203ENST00000471751 PMVKQ15126 192 aa12.89□□□□□ -0.35
SNX4-203ENST00000471751 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
SNX4-203ENST00000471751 PRR34Q9NV39 138 aa12.89□□□□□ -0.35
SNX4-203ENST00000471751 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
SNX4-203ENST00000471751 IGLV4-60A0A075B6I1 120 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 FABP4P15090 132 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 Q8N976 141 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 FAM104AQ969W3 186 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 RYR2Q92736 4967 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 TRAV8-4A0A0B4J246 113 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 ANGP03950 147 aaKnown RBP12.88□□□□□ -0.35
SNX4-203ENST00000471751 PRSS1P07477 247 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 SEC11AP67812 179 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 FAM19A3Q7Z5A8 133 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
SNX4-203ENST00000471751 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
SNX4-203ENST00000471751 IBA57-AS1B1ANH7 110 aa12.87□□□□□ -0.35
SNX4-203ENST00000471751 PET117Q6UWS5 81 aa12.87□□□□□ -0.35
SNX4-203ENST00000471751 PLECQ15149 4684 aaKnown RBP12.86□□□□□ -0.35
SNX4-203ENST00000471751 TRAV8-3A0A0A6YYJ7 113 aa12.86□□□□□ -0.35
SNX4-203ENST00000471751 LCE6AA0A183 80 aa12.86□□□□□ -0.35
SNX4-203ENST00000471751 MIAQ16674 131 aa12.86□□□□□ -0.35
SNX4-203ENST00000471751 Q6ZUT4 128 aa12.86□□□□□ -0.35
SNX4-203ENST00000471751 CST9LQ9H4G1 147 aa12.86□□□□□ -0.35
SNX4-203ENST00000471751 IFITM10A6NMD0 228 aa12.85□□□□□ -0.35
SNX4-203ENST00000471751 SYS1-DBNDD2H3BUS1 97 aa12.85□□□□□ -0.35
SNX4-203ENST00000471751 REG3AQ06141 175 aa12.85□□□□□ -0.35
SNX4-203ENST00000471751 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
SNX4-203ENST00000471751 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 IGHV3-33P01772 117 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 CRPP02741 224 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
SNX4-203ENST00000471751 PRSS29PA6NIE9 313 aa12.83□□□□□ -0.36
SNX4-203ENST00000471751 SS18Q15532 418 aa12.83□□□□□ -0.36
SNX4-203ENST00000471751 LINC00173Q6ZV60 143 aa12.83□□□□□ -0.36
SNX4-203ENST00000471751 OPRPNQ99935 248 aaPredicted RBP12.83□□□□□ -0.36
SNX4-203ENST00000471751 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
SNX4-203ENST00000471751 COX11Q9Y6N1 276 aa12.82□□□□□ -0.36
SNX4-203ENST00000471751 NBDYA0A0U1RRE5 68 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 LINC00959A0A1B0GUT2 108 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 C20orf202A1L168 122 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 F8VRH5 84 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 UBE2D1P51668 147 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 RMI2Q96E14 147 aa12.81□□□□□ -0.36
SNX4-203ENST00000471751 LINC01545Q5VT33 79 aa12.8□□□□□ -0.36
SNX4-203ENST00000471751 TINCRA0A1B0GVN0 87 aa12.79□□□□□ -0.36
SNX4-203ENST00000471751 HERVK_113P63121 156 aa12.79□□□□□ -0.36
SNX4-203ENST00000471751 ODF1Q14990 250 aa12.79□□□□□ -0.36
SNX4-203ENST00000471751 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
SNX4-203ENST00000471751 OR10D4PQ8NGN7 298 aa12.79□□□□□ -0.36
SNX4-203ENST00000471751 UBE2WQ96B02 151 aa12.79□□□□□ -0.36
SNX4-203ENST00000471751 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
SNX4-203ENST00000471751 LY6G6CO95867 125 aa12.78□□□□□ -0.36
SNX4-203ENST00000471751 IGLC3P0DOY3 106 aa12.78□□□□□ -0.36
SNX4-203ENST00000471751 PLNP26678 52 aa12.78□□□□□ -0.36
SNX4-203ENST00000471751 KRTDAPP60985 99 aa12.78□□□□□ -0.36
SNX4-203ENST00000471751 Q8N3U1 123 aa12.78□□□□□ -0.36
SNX4-203ENST00000471751 LINC01561Q8N1V8 128 aa12.77□□□□□ -0.37
SNX4-203ENST00000471751 TRAV13-1A0A0B4J241 112 aa12.76□□□□□ -0.37
SNX4-203ENST00000471751 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
SNX4-203ENST00000471751 LINC00242Q5T6M2 205 aa12.76□□□□□ -0.37
SNX4-203ENST00000471751 CD164L2Q6UWJ8 174 aa12.76□□□□□ -0.37
SNX4-203ENST00000471751 TM2D2Q9BX73 214 aa12.76□□□□□ -0.37
SNX4-203ENST00000471751 IGLV5-45A0A087WSX0 123 aa12.75□□□□□ -0.37
SNX4-203ENST00000471751 Q6ZR54 194 aa12.75□□□□□ -0.37
SNX4-203ENST00000471751 C1orf43Q9BWL3 253 aa12.75□□□□□ -0.37
SNX4-203ENST00000471751 VPS13DQ5THJ4 4388 aa12.75□□□□□ -0.37
SNX4-203ENST00000471751 DPM2O94777 84 aa12.74□□□□□ -0.37
SNX4-203ENST00000471751 GEMIN7Q9H840 131 aaKnown RBP12.74□□□□□ -0.37
SNX4-203ENST00000471751 MRPL35Q9NZE8 188 aaKnown RBP12.74□□□□□ -0.37
SNX4-203ENST00000471751 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
SNX4-203ENST00000471751 IGHV3OR16-9A0A0B4J2B5 98 aa12.73□□□□□ -0.37
SNX4-203ENST00000471751 JOSD1Q15040 202 aaPredicted RBP12.73□□□□□ -0.37
SNX4-203ENST00000471751 CHCHD10Q8WYQ3 142 aaPredicted RBP12.73□□□□□ -0.37
SNX4-203ENST00000471751 IGKCP01834 107 aa12.72□□□□□ -0.37
SNX4-203ENST00000471751 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms