RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MYO7AQ13402 2215 aa1.32□□□□□ -2.2
SMC5-202ENST00000471372 MYOM1P52179 1685 aa1.32□□□□□ -2.2
SMC5-202ENST00000471372 SFT2D2O95562 160 aa1.31□□□□□ -2.2
SMC5-202ENST00000471372 LINC00472Q9H8W2 130 aa1.31□□□□□ -2.2
SMC5-202ENST00000471372 KDM5AP29375 1690 aaKnown RBP1.31□□□□□ -2.2
SMC5-202ENST00000471372 KIF21AQ7Z4S6 1674 aa1.31□□□□□ -2.2
SMC5-202ENST00000471372 ARHGEF5Q12774 1597 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 ZNF469Q96JG9 3925 aaPredicted RBP1.3□□□□□ -2.2
SMC5-202ENST00000471372 M0R143 59 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 PIN1P1O15428 100 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 SSBP3-AS1Q7Z2R9 100 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 PLAC8Q9NZF1 115 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 ZNF609O15014 1411 aa1.3□□□□□ -2.2
SMC5-202ENST00000471372 TCHHQ07283 1943 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 GNGT2O14610 69 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 APOC3P02656 99 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 MT-ATP8P03928 68 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 KRTDAPP60985 99 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 COX17Q14061 63 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 SHANK2Q9UPX8 1470 aa1.29□□□□□ -2.2
SMC5-202ENST00000471372 CADP27708 2225 aa1.28□□□□□ -2.2
SMC5-202ENST00000471372 ZNF815PA8K554 130 aa1.28□□□□□ -2.2
SMC5-202ENST00000471372 SEC11AP67812 179 aa1.28□□□□□ -2.2
SMC5-202ENST00000471372 ARL2-SNX15V9GYD0 113 aa1.28□□□□□ -2.2
SMC5-202ENST00000471372 ABCA3Q99758 1704 aa1.27□□□□□ -2.21
SMC5-202ENST00000471372 TOPAZ1Q8N9V7 1692 aa1.27□□□□□ -2.21
SMC5-202ENST00000471372 VPS8Q8N3P4 1428 aa1.27□□□□□ -2.21
SMC5-202ENST00000471372 S100A8P05109 93 aa1.27□□□□□ -2.21
SMC5-202ENST00000471372 NXT2Q9NPJ8 142 aaKnown RBP1.27□□□□□ -2.21
SMC5-202ENST00000471372 HMGXB3Q12766 1538 aa1.26□□□□□ -2.21
SMC5-202ENST00000471372 C10orf142B7Z368 130 aa1.26□□□□□ -2.21
SMC5-202ENST00000471372 IGLC1P0CG04 106 aa1.26□□□□□ -2.21
SMC5-202ENST00000471372 HAMPP81172 84 aa1.26□□□□□ -2.21
SMC5-202ENST00000471372 FAM223AQ8IWN6 122 aa1.26□□□□□ -2.21
SMC5-202ENST00000471372 UNC13BO14795 1591 aa1.25□□□□□ -2.21
SMC5-202ENST00000471372 COX6CP09669 75 aa1.25□□□□□ -2.21
SMC5-202ENST00000471372 TRAPPC2P0DI81 140 aa1.25□□□□□ -2.21
SMC5-202ENST00000471372 TRAPPC2BP0DI82 140 aa1.25□□□□□ -2.21
SMC5-202ENST00000471372 CCNB3Q8WWL7 1395 aa1.24□□□□□ -2.21
SMC5-202ENST00000471372 CHD1O14646 1710 aa1.24□□□□□ -2.21
SMC5-202ENST00000471372 COX6A2Q02221 97 aa1.24□□□□□ -2.21
SMC5-202ENST00000471372 ABCC10Q5T3U5 1492 aa1.24□□□□□ -2.21
SMC5-202ENST00000471372 M0R3E3 92 aa1.23□□□□□ -2.21
SMC5-202ENST00000471372 EHBP1L1Q8N3D4 1523 aa1.23□□□□□ -2.21
SMC5-202ENST00000471372 FRAS1Q86XX4 4008 aa1.23□□□□□ -2.21
SMC5-202ENST00000471372 TOP2BQ02880 1626 aa1.22□□□□□ -2.21
SMC5-202ENST00000471372 LRRC37A2A6NM11 1700 aa1.22□□□□□ -2.21
SMC5-202ENST00000471372 Q6JHZ5 121 aa1.21□□□□□ -2.22
SMC5-202ENST00000471372 PMCHL2Q9BQD1 86 aa1.21□□□□□ -2.22
SMC5-202ENST00000471372 FAIMQ9NVQ4 179 aa1.21□□□□□ -2.22
SMC5-202ENST00000471372 AP4S1Q9Y587 144 aa1.21□□□□□ -2.22
SMC5-202ENST00000471372 ASXL3Q9C0F0 2248 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 PRH1P02810 166 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 MGPP08493 103 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 DPY30Q9C005 99 aa1.2□□□□□ -2.22
SMC5-202ENST00000471372 PKIAP61925 76 aa1.19□□□□□ -2.22
SMC5-202ENST00000471372 SBF2Q86WG5 1849 aa1.19□□□□□ -2.22
SMC5-202ENST00000471372 DIP2CQ9Y2E4 1556 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 CACNA1HO95180 2353 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 FAM223BA6NKX1 122 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 SNHG12Q9BXW3 62 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 ANKRD36BQ8N2N9 1353 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 LRP6O75581 1613 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 TEX14Q8IWB6 1497 aa1.18□□□□□ -2.22
SMC5-202ENST00000471372 APCP25054 2843 aa1.17□□□□□ -2.22
SMC5-202ENST00000471372 KCPQ6ZWJ8 1503 aa1.17□□□□□ -2.22
SMC5-202ENST00000471372 LINC00032P0C843 101 aa1.17□□□□□ -2.22
SMC5-202ENST00000471372 SPRR4Q96PI1 79 aa1.17□□□□□ -2.22
SMC5-202ENST00000471372 BTAF1O14981 1849 aa1.17□□□□□ -2.22
SMC5-202ENST00000471372 KDM3BQ7LBC6 1761 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 BCE1O60756 84 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 UBA52P62987 128 aaKnown RBP1.16□□□□□ -2.22
SMC5-202ENST00000471372 COL5A1-AS1Q5SY13 56 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 PLXNB2O15031 1838 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 WNK3Q9BYP7 1800 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 SCN7AQ01118 1682 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 COL4A6Q14031 1691 aa1.16□□□□□ -2.22
SMC5-202ENST00000471372 PRDM15P57071 1507 aaPredicted RBP1.15□□□□□ -2.22
SMC5-202ENST00000471372 A0A0G2JND7 137 aa1.15□□□□□ -2.23
SMC5-202ENST00000471372 FYCO1Q9BQS8 1478 aa1.15□□□□□ -2.23
SMC5-202ENST00000471372 TTC28Q96AY4 2481 aa1.14□□□□□ -2.23
SMC5-202ENST00000471372 GAPVD1Q14C86 1478 aa1.14□□□□□ -2.23
SMC5-202ENST00000471372 RAPGEF6Q8TEU7 1601 aa1.14□□□□□ -2.23
SMC5-202ENST00000471372 NSD3Q9BZ95 1437 aa1.14□□□□□ -2.23
SMC5-202ENST00000471372 ADGRL2O95490 1459 aa1.13□□□□□ -2.23
SMC5-202ENST00000471372 NDUFC1O43677 76 aa1.13□□□□□ -2.23
SMC5-202ENST00000471372 SMR3AQ99954 134 aa1.13□□□□□ -2.23
SMC5-202ENST00000471372 CACFD1Q9UGQ2 172 aa1.13□□□□□ -2.23
SMC5-202ENST00000471372 LAMC1P11047 1609 aa1.13□□□□□ -2.23
SMC5-202ENST00000471372 ERCC6L2Q5T890 1561 aa1.13□□□□□ -2.23
SMC5-202ENST00000471372 A0A1B0GWA3 101 aa1.12□□□□□ -2.23
SMC5-202ENST00000471372 SAA2P0DJI9 122 aaPredicted RBP1.12□□□□□ -2.23
SMC5-202ENST00000471372 TMEM263Q8WUH6 116 aaKnown RBP1.12□□□□□ -2.23
SMC5-202ENST00000471372 BDP1A6H8Y1 2624 aa1.12□□□□□ -2.23
SMC5-202ENST00000471372 A0A0D9SFI3 127 aa1.11□□□□□ -2.23
SMC5-202ENST00000471372 ATOX1O00244 68 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms