RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 DCANP1Q8TF63 244 aa10.06□□□□□ -0.8
NPHP4-207ENST00000470763 DAZ2Q13117 558 aaKnown RBP10.06□□□□□ -0.8
NPHP4-207ENST00000470763 DAZ4Q86SG3 579 aaKnown RBP10.06□□□□□ -0.8
NPHP4-207ENST00000470763 DAZ3Q9NR90 486 aaKnown RBP10.06□□□□□ -0.8
NPHP4-207ENST00000470763 CSDC2Q9Y534 153 aaKnown RBP10.06□□□□□ -0.8
NPHP4-207ENST00000470763 IGHV1OR15-1A0A075B7D0 117 aa10.06□□□□□ -0.8
NPHP4-207ENST00000470763 KNCNA6PVL3 124 aa10.06□□□□□ -0.8
NPHP4-207ENST00000470763 Q8N2B8 174 aa10.05□□□□□ -0.8
NPHP4-207ENST00000470763 NRGNQ92686 78 aa10.05□□□□□ -0.8
NPHP4-207ENST00000470763 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
NPHP4-207ENST00000470763 IGHG2P01859 326 aa10.05□□□□□ -0.8
NPHP4-207ENST00000470763 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
NPHP4-207ENST00000470763 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
NPHP4-207ENST00000470763 ACYP1P07311 99 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 UQCRQO14949 82 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 LINC00643Q86TS7 51 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 PRM2P04554 102 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
NPHP4-207ENST00000470763 RS1O15537 224 aa10.03□□□□□ -0.8
NPHP4-207ENST00000470763 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
NPHP4-207ENST00000470763 COX7A2LO14548 114 aa10.03□□□□□ -0.8
NPHP4-207ENST00000470763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.02□□□□□ -0.81
NPHP4-207ENST00000470763 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 BPESC1Q9GZL8 116 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 CCDC168Q8NDH2 2452 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 EDA2RQ9HAV5 297 aa10.02□□□□□ -0.81
NPHP4-207ENST00000470763 CUBNO60494 3623 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 BAALC-AS2P0C853 105 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 BLCAPP62952 87 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 Q9H8V8 135 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 USMG5Q96IX5 58 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
NPHP4-207ENST00000470763 TIRAPP58753 221 aa10□□□□□ -0.81
NPHP4-207ENST00000470763 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
NPHP4-207ENST00000470763 SPG11Q96JI7 2443 aa10□□□□□ -0.81
NPHP4-207ENST00000470763 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
NPHP4-207ENST00000470763 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
NPHP4-207ENST00000470763 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
NPHP4-207ENST00000470763 Q9HAA7 133 aa10□□□□□ -0.81
NPHP4-207ENST00000470763 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
NPHP4-207ENST00000470763 CSPG4Q6UVK1 2322 aa9.99□□□□□ -0.81
NPHP4-207ENST00000470763 NDUFA1O15239 70 aa9.99□□□□□ -0.81
NPHP4-207ENST00000470763 Q6ZSN1 163 aa9.99□□□□□ -0.81
NPHP4-207ENST00000470763 FAM19A5Q7Z5A7 132 aaPredicted RBP9.99□□□□□ -0.81
NPHP4-207ENST00000470763 TIMM17BO60830 172 aa9.99□□□□□ -0.81
NPHP4-207ENST00000470763 LMO4P61968 165 aa9.99□□□□□ -0.81
NPHP4-207ENST00000470763 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
NPHP4-207ENST00000470763 ANKRD17O75179 2603 aaKnown RBP9.98□□□□□ -0.81
NPHP4-207ENST00000470763 hADV29S1A0JD25 119 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 COX7CP15954 63 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 HOXD3P31249 432 aaPredicted RBP9.98□□□□□ -0.81
NPHP4-207ENST00000470763 COX6A2Q02221 97 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 ZNF469Q96JG9 3925 aaPredicted RBP9.98□□□□□ -0.81
NPHP4-207ENST00000470763 J3KT08 172 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 RBMY1A1P0DJD3 496 aaKnown RBP9.98□□□□□ -0.81
NPHP4-207ENST00000470763 RBMY1CP0DJD4 496 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 RBMY1FQ15415 496 aaKnown RBP9.98□□□□□ -0.81
NPHP4-207ENST00000470763 FBXL19-AS1Q494R0 122 aa9.98□□□□□ -0.81
NPHP4-207ENST00000470763 C2CD3Q4AC94 2353 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
NPHP4-207ENST00000470763 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 TRAV13-1A0A0B4J241 112 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 H3BUX3 64 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 PEMTQ9UBM1 199 aa9.97□□□□□ -0.81
NPHP4-207ENST00000470763 HIVEP1P15822 2718 aa9.96□□□□□ -0.81
NPHP4-207ENST00000470763 C2orf48Q96LS8 159 aa9.96□□□□□ -0.81
NPHP4-207ENST00000470763 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
NPHP4-207ENST00000470763 SMIM9A6NGZ8 99 aa9.95□□□□□ -0.82
NPHP4-207ENST00000470763 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
NPHP4-207ENST00000470763 PIK3CD-AS1Q5SR53 167 aa9.95□□□□□ -0.82
NPHP4-207ENST00000470763 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
NPHP4-207ENST00000470763 TRACP01848 142 aa9.94□□□□□ -0.82
NPHP4-207ENST00000470763 ATP5G1P05496 136 aa9.94□□□□□ -0.82
NPHP4-207ENST00000470763 C10orf99Q6UWK7 81 aa9.94□□□□□ -0.82
NPHP4-207ENST00000470763 LRRC75A-AS1Q8N1F1 130 aa9.94□□□□□ -0.82
NPHP4-207ENST00000470763 IGHV4-38-2P0DP08 117 aa9.93□□□□□ -0.82
NPHP4-207ENST00000470763 CXCL5P42830 114 aa9.93□□□□□ -0.82
NPHP4-207ENST00000470763 NOTCH3Q9UM47 2321 aa9.93□□□□□ -0.82
NPHP4-207ENST00000470763 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
NPHP4-207ENST00000470763 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
NPHP4-207ENST00000470763 H3BUA1 57 aa9.93□□□□□ -0.82
NPHP4-207ENST00000470763 C9orf129Q5T035 196 aaKnown RBP9.93□□□□□ -0.82
NPHP4-207ENST00000470763 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
NPHP4-207ENST00000470763 K7EMT4 169 aa9.92□□□□□ -0.82
NPHP4-207ENST00000470763 K7EQG2 157 aa9.92□□□□□ -0.82
NPHP4-207ENST00000470763 KIR2DL5BQ8NHK3 375 aa9.92□□□□□ -0.82
NPHP4-207ENST00000470763 CRYGAP11844 174 aa9.92□□□□□ -0.82
NPHP4-207ENST00000470763 A0A087WVE0 104 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
NPHP4-207ENST00000470763 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms