RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C16orf95Q9H693 158 aa10.51□□□□□ -0.73
CBWD3-205ENST00000469687 NOP10Q9NPE3 64 aaKnown RBP10.51□□□□□ -0.73
CBWD3-205ENST00000469687 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
CBWD3-205ENST00000469687 TMEM263Q8WUH6 116 aaKnown RBP10.5□□□□□ -0.73
CBWD3-205ENST00000469687 LITAFQ99732 161 aa10.5□□□□□ -0.73
CBWD3-205ENST00000469687 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
CBWD3-205ENST00000469687 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
CBWD3-205ENST00000469687 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
CBWD3-205ENST00000469687 NDUFA7O95182 113 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 INSL3P51460 131 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 CDKN2A-AS1Q9UH64 79 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 KMT2BQ9UMN6 2715 aaPredicted RBP10.49□□□□□ -0.73
CBWD3-205ENST00000469687 PLAC8L1A1L4L8 177 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 TMEM238C9JI98 176 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 K7EQD1 137 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 TCL1BO95988 128 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
CBWD3-205ENST00000469687 H7C2G1 150 aa10.48□□□□□ -0.73
CBWD3-205ENST00000469687 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
CBWD3-205ENST00000469687 COX6A2Q02221 97 aa10.48□□□□□ -0.73
CBWD3-205ENST00000469687 ZNF418Q8TF45 676 aaPredicted RBP10.48□□□□□ -0.73
CBWD3-205ENST00000469687 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
CBWD3-205ENST00000469687 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
CBWD3-205ENST00000469687 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
CBWD3-205ENST00000469687 GAGE4Q13068 117 aa10.47□□□□□ -0.73
CBWD3-205ENST00000469687 GAGE5Q13069 117 aa10.47□□□□□ -0.73
CBWD3-205ENST00000469687 DGAT2L7PQ6IED9 249 aa10.47□□□□□ -0.73
CBWD3-205ENST00000469687 J3QKU1 62 aa10.46□□□□□ -0.73
CBWD3-205ENST00000469687 IGHV3-33P01772 117 aa10.46□□□□□ -0.73
CBWD3-205ENST00000469687 NPC2P61916 151 aa10.46□□□□□ -0.73
CBWD3-205ENST00000469687 HIVEP2P31629 2446 aa10.46□□□□□ -0.73
CBWD3-205ENST00000469687 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.74
CBWD3-205ENST00000469687 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.74
CBWD3-205ENST00000469687 LOC100131303A0A0U1RQF7 123 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 GAGE7O76087 117 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 GAGE12FP0CL80 117 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 GAGE12GP0CL81 117 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 GAGE12IP0CL82 117 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 HILS1P60008 231 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 PRSS2P07478 247 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 KRTAP10-3P60369 221 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
CBWD3-205ENST00000469687 FN1P02751 2386 aaKnown RBP10.44□□□□□ -0.74
CBWD3-205ENST00000469687 A0A0B4J2C4 111 aa10.44□□□□□ -0.74
CBWD3-205ENST00000469687 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
CBWD3-205ENST00000469687 DAZ2Q13117 558 aaKnown RBP10.44□□□□□ -0.74
CBWD3-205ENST00000469687 LINC00242Q5T6M2 205 aa10.44□□□□□ -0.74
CBWD3-205ENST00000469687 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
CBWD3-205ENST00000469687 TMEM101Q96IK0 257 aa10.44□□□□□ -0.74
CBWD3-205ENST00000469687 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 TRBV10-1A0A0K0K1A3 114 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 DAND5Q8N907 189 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 VWFP04275 2813 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 TRAV13-1A0A0B4J241 112 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 TIRAPP58753 221 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
CBWD3-205ENST00000469687 SBSPONQ8IVN8 264 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
CBWD3-205ENST00000469687 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
CBWD3-205ENST00000469687 LYRM7Q5U5X0 104 aa10.42□□□□□ -0.74
CBWD3-205ENST00000469687 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
CBWD3-205ENST00000469687 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
CBWD3-205ENST00000469687 HECTD1Q9ULT8 2610 aa10.42□□□□□ -0.74
CBWD3-205ENST00000469687 SPANXDQ9BXN6 97 aa10.41□□□□□ -0.74
CBWD3-205ENST00000469687 SPANXCQ9NY87 97 aa10.41□□□□□ -0.74
CBWD3-205ENST00000469687 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-205ENST00000469687 CMC4P56277 68 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-205ENST00000469687 MIAQ16674 131 aa10.41□□□□□ -0.74
CBWD3-205ENST00000469687 Q1RN00 199 aa10.41□□□□□ -0.74
CBWD3-205ENST00000469687 FAM110AQ9BQ89 295 aa10.41□□□□□ -0.74
CBWD3-205ENST00000469687 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
CBWD3-205ENST00000469687 OTOGQ6ZRI0 2925 aa10.4□□□□□ -0.74
CBWD3-205ENST00000469687 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.74
CBWD3-205ENST00000469687 HERVK_113P63121 156 aa10.39□□□□□ -0.75
CBWD3-205ENST00000469687 FOXI1Q12951 378 aa10.39□□□□□ -0.75
CBWD3-205ENST00000469687 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
CBWD3-205ENST00000469687 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
CBWD3-205ENST00000469687 NBEAL2Q6ZNJ1 2754 aa10.39□□□□□ -0.75
CBWD3-205ENST00000469687 NOTCH2Q04721 2471 aa10.39□□□□□ -0.75
CBWD3-205ENST00000469687 NDUFA1O15239 70 aa10.39□□□□□ -0.75
CBWD3-205ENST00000469687 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
CBWD3-205ENST00000469687 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 J3QR89 54 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 OVOL2Q9BRP0 275 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 Q9H8V8 135 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 A0A0U1RRA0 63 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 SPATA3Q8NHX4 192 aa10.38□□□□□ -0.75
CBWD3-205ENST00000469687 TRGV4A0A0C4DH28 118 aa10.37□□□□□ -0.75
CBWD3-205ENST00000469687 TRIAP1O43715 76 aa10.37□□□□□ -0.75
CBWD3-205ENST00000469687 CARD19Q96LW7 228 aa10.37□□□□□ -0.75
CBWD3-205ENST00000469687 TMEM243Q9BU79 118 aa10.36□□□□□ -0.75
CBWD3-205ENST00000469687 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
CBWD3-205ENST00000469687 C9JAW5 83 aa10.36□□□□□ -0.75
CBWD3-205ENST00000469687 UBE2L6O14933 153 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms