RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 LITAFQ99732 161 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 H7C2G1 150 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 DEFB136Q30KP8 78 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 CEMP1Q6PRD7 247 aaPredicted RBP10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 C9JAW5 83 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 CRLF1O75462 422 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 C18orf65Q6ZTR6 163 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
SMARCD3-205ENST00000469154 TRAV8-3A0A0A6YYJ7 113 aa10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 RNASE1P07998 156 aaKnown RBP10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 FHL3Q13643 280 aa10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 Q8N2B8 174 aa10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
SMARCD3-205ENST00000469154 INSP01308 110 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 IGHV3-53P01767 116 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 Q6ZSN1 163 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 Q6ZUT4 128 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 ADARB2-AS1A8MUL3 147 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 RNASE13Q5GAN3 156 aaKnown RBP10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 Q6ZSV7 163 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 DYNLRB2Q8TF09 96 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 LINC01587Q99440 93 aa10.29□□□□□ -0.76
SMARCD3-205ENST00000469154 TMEM262E9PQX1 116 aa10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 MIAQ16674 131 aa10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 SORL1Q92673 2214 aa10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 RS1O15537 224 aa10.28□□□□□ -0.76
SMARCD3-205ENST00000469154 PRM2P04554 102 aa10.27□□□□□ -0.76
SMARCD3-205ENST00000469154 LINC01620Q4KN68 170 aa10.27□□□□□ -0.76
SMARCD3-205ENST00000469154 LINC01600Q96MT4 127 aa10.27□□□□□ -0.76
SMARCD3-205ENST00000469154 GEMIN7Q9H840 131 aaKnown RBP10.27□□□□□ -0.76
SMARCD3-205ENST00000469154 TIMM17BO60830 172 aa10.27□□□□□ -0.77
SMARCD3-205ENST00000469154 MT-ATP8P03928 68 aa10.27□□□□□ -0.77
SMARCD3-205ENST00000469154 XGP55808 180 aa10.27□□□□□ -0.77
SMARCD3-205ENST00000469154 CKS1BP61024 79 aa10.27□□□□□ -0.77
SMARCD3-205ENST00000469154 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
SMARCD3-205ENST00000469154 PRSS2P07478 247 aa10.26□□□□□ -0.77
SMARCD3-205ENST00000469154 RNF183Q96D59 192 aa10.26□□□□□ -0.77
SMARCD3-205ENST00000469154 Q9UF83 564 aa10.26□□□□□ -0.77
SMARCD3-205ENST00000469154 TRIAP1O43715 76 aa10.26□□□□□ -0.77
SMARCD3-205ENST00000469154 C2CD3Q4AC94 2353 aa10.25□□□□□ -0.77
SMARCD3-205ENST00000469154 TIRAPP58753 221 aa10.25□□□□□ -0.77
SMARCD3-205ENST00000469154 ADAMTSL4-AS1Q5T5F5 129 aa10.25□□□□□ -0.77
SMARCD3-205ENST00000469154 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
SMARCD3-205ENST00000469154 KHDC1LQ5JSQ8 128 aa10.25□□□□□ -0.77
SMARCD3-205ENST00000469154 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
SMARCD3-205ENST00000469154 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
SMARCD3-205ENST00000469154 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
SMARCD3-205ENST00000469154 IFITM1P13164 125 aa10.24□□□□□ -0.77
SMARCD3-205ENST00000469154 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
SMARCD3-205ENST00000469154 COX6CP09669 75 aa10.23□□□□□ -0.77
SMARCD3-205ENST00000469154 NDUFA1O15239 70 aa10.23□□□□□ -0.77
SMARCD3-205ENST00000469154 DGAT2L7PQ6IED9 249 aa10.23□□□□□ -0.77
SMARCD3-205ENST00000469154 LINC01006Q8NI28 216 aa10.23□□□□□ -0.77
SMARCD3-205ENST00000469154 A8MZ25 164 aa10.22□□□□□ -0.77
SMARCD3-205ENST00000469154 RPL13AP40429 203 aaKnown RBP10.22□□□□□ -0.77
SMARCD3-205ENST00000469154 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
SMARCD3-205ENST00000469154 CDKN2A-AS1Q9UH64 79 aa10.22□□□□□ -0.77
SMARCD3-205ENST00000469154 HIST2H2BDQ6DRA6 164 aa10.21□□□□□ -0.77
SMARCD3-205ENST00000469154 TRAV25A0A0B4J276 109 aa10.21□□□□□ -0.78
SMARCD3-205ENST00000469154 C16orf95Q9H693 158 aa10.21□□□□□ -0.78
SMARCD3-205ENST00000469154 HERVK_113P63121 156 aa10.2□□□□□ -0.78
SMARCD3-205ENST00000469154 C11orf44Q8N8P7 122 aa10.2□□□□□ -0.78
SMARCD3-205ENST00000469154 IL17DQ8TAD2 202 aa10.2□□□□□ -0.78
SMARCD3-205ENST00000469154 TMEM101Q96IK0 257 aa10.2□□□□□ -0.78
SMARCD3-205ENST00000469154 H3BT86 120 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 NPC2P61916 151 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 ODF3L2Q3SX64 289 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 FAM19A3Q7Z5A8 133 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 STHQ8IWL8 128 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
SMARCD3-205ENST00000469154 NDUFA7O95182 113 aa10.18□□□□□ -0.78
SMARCD3-205ENST00000469154 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
SMARCD3-205ENST00000469154 IGLV5-39A0A0G2JS06 123 aa10.18□□□□□ -0.78
SMARCD3-205ENST00000469154 C2orf82Q6UX34 121 aa10.18□□□□□ -0.78
SMARCD3-205ENST00000469154 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 K7EQD1 137 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 LST1O00453 97 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 ATRQ13535 2644 aa10.17□□□□□ -0.78
SMARCD3-205ENST00000469154 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
SMARCD3-205ENST00000469154 H7C423 109 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms