RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 FAM236AA0A1B0GUQ0 79 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 FAM236BA0A1B0GV22 79 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 TMEM30CPA0ZSE6 113 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 CRYM-AS1A6NIL9 109 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 ZNF727A8MUV8 499 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 TIMM17BO60830 172 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 PGLYRP1O75594 196 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 IGKV1-16P04430 117 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 CTSDP07339 412 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 DEFA4P12838 97 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 RNASE4P34096 147 aaKnown RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 RPL7L1Q6DKI1 246 aaKnown RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 LYZL1Q6UWQ5 148 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 SLC35E3Q7Z769 313 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 TEN1Q86WV5 123 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 PKD1L2Q7Z442 2459 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 ANKRD17O75179 2603 aaKnown RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 USP24Q9UPU5 2620 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 CELSR2Q9HCU4 2923 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRBV6-7A0A0A0MS04 114 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 MDFIC2A0A1B0GVS7 189 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 KANTRA0A1W2PQU2 76 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 LRCOL1A6NCL2 159 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 SNRPGP15A8MWD9 76 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 H7C2G1 150 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 M0R233 179 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 SYNGR2O43760 224 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRGC1P0CF51 173 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 CKS2P33552 79 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 BLCAPP62952 87 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 SSBP1Q04837 148 aaKnown RBP2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 TFF3Q07654 80 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 CIRBPQ14011 172 aaKnown RBP2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 HMGN3Q15651 99 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 LY6EQ16553 131 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 MPV17LQ2QL34 196 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 CLLU1Q5K131 121 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 SPANXN5Q5MJ07 72 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 C10orf55Q5SWW7 151 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 C2orf91Q6ZV80 131 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 MUC7Q8TAX7 377 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 MRPS24Q96EL2 167 aaKnown RBP2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 HYLS1Q96M11 299 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 LINC00052Q96N35 136 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 TMEM106BQ9NUM4 274 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 HILPDAQ9Y5L2 63 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 NBPF19A0A087WUL8 3843 aa2.17□□□□□ -2.06
HMGB1P25-201ENST00000468402 PIEZO1Q92508 2521 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 IGLV3-9A0A075B6K5 115 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRBV20-1A0A075B6N2 111 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 IGKV1D-37A0A075B6S9 117 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRAV7A0A075B6U4 112 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 PIGBOS1A0A0B4J2F0 54 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRBV10-2A0A0K0K1G8 114 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 UBE2L5PA0A1B0GUS4 154 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 CEBPZOSA8MTT3 80 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 FNDC10F2Z333 226 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 C17orf112F2Z3M2 114 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 ZNF737O75373 536 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRAPPC2P0DI81 140 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRAPPC2BP0DI82 140 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 SAA1P0DJI8 122 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 SAA2P0DJI9 122 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 FABP4P15090 132 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 FUSP35637 526 aaKnown RBP eCLIP2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 TMEM258P61165 79 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 SNRPD3P62318 126 aaKnown RBP2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 HSD52Q0P140 79 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 Q56UQ5 140 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 MRPL54Q6P161 138 aaKnown RBP2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 DYNAPQ8N1N2 210 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 C1orf64Q8NEQ6 169 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 DIRC1Q969H9 104 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 DPH3Q96FX2 82 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 OR8B2Q96RD0 313 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 HIGD2AQ9BW72 106 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 PSENENQ9NZ42 101 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 EPG5Q9HCE0 2579 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 FLNCQ14315 2725 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 ZFYVE26Q68DK2 2539 aa2.16□□□□□ -2.06
HMGB1P25-201ENST00000468402 ACACBO00763 2458 aa2.15□□□□□ -2.06
HMGB1P25-201ENST00000468402 TENM4Q6N022 2769 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 TRAV12-2A0A075B6T6 113 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 C11orf86A6NJI1 115 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF705FA8MVS1 300 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 E7EUB6 86 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 LY6LH3BQJ8 138 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 CCL25O15444 150 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 GNRH2O43555 120 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 TRACP01848 142 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 PRH1P02810 166 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 SLC25A4P12235 298 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 IFITM1P13164 125 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 ZNF90Q03938 601 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 FAM229BQ4G0N7 80 aa2.15□□□□□ -2.07
HMGB1P25-201ENST00000468402 BRD3OSQ6XYD6 125 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms