RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.18□□□□□ -1.26
MSH5-213ENST00000468136 IGKV2-29A2NJV5 120 aaPredicted RBP7.18□□□□□ -1.26
MSH5-213ENST00000468136 A6NDN8 102 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 H3BNG1 76 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 LEPROTO15243 131 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 CCL25O15444 150 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 GYPEP15421 78 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 KRTAP10-11P60412 298 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 PCP2Q8IVA1 136 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 GEMIN7Q9H840 131 aaKnown RBP7.18□□□□□ -1.26
MSH5-213ENST00000468136 Q9UF83 564 aa7.18□□□□□ -1.26
MSH5-213ENST00000468136 IGLV5-45A0A087WSX0 123 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 IGKV2D-26A0A0A0MRZ7 120 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 TRAV8-6A0A0B4J262 113 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
MSH5-213ENST00000468136 UBE2D1P51668 147 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 MRPL23Q16540 153 aaKnown RBP7.17□□□□□ -1.26
MSH5-213ENST00000468136 BVES-AS1Q5T3Y7 98 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 NTM-AS1Q6ZSK4 140 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 CDC42SE2Q9NRR3 84 aa7.17□□□□□ -1.26
MSH5-213ENST00000468136 A0A1B0GUV1 79 aa7.16□□□□□ -1.26
MSH5-213ENST00000468136 CYSRT1A8MQ03 144 aa7.16□□□□□ -1.26
MSH5-213ENST00000468136 LGALS3P17931 250 aaKnown RBP7.16□□□□□ -1.26
MSH5-213ENST00000468136 HINT1P49773 126 aaPredicted RBP7.16□□□□□ -1.26
MSH5-213ENST00000468136 BATFQ16520 125 aa7.16□□□□□ -1.26
MSH5-213ENST00000468136 MPV17L2Q567V2 206 aa7.16□□□□□ -1.26
MSH5-213ENST00000468136 Q6ZUT4 128 aa7.16□□□□□ -1.26
MSH5-213ENST00000468136 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
MSH5-213ENST00000468136 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
MSH5-213ENST00000468136 A0A0J9YXV3 536 aa7.15□□□□□ -1.26
MSH5-213ENST00000468136 ZNF815PA8K554 130 aa7.15□□□□□ -1.26
MSH5-213ENST00000468136 J3QQQ9 107 aa7.15□□□□□ -1.26
MSH5-213ENST00000468136 KPRPQ5T749 579 aaPredicted RBP7.15□□□□□ -1.26
MSH5-213ENST00000468136 FAM104AQ969W3 186 aa7.15□□□□□ -1.26
MSH5-213ENST00000468136 OPRPNQ99935 248 aaPredicted RBP7.15□□□□□ -1.26
MSH5-213ENST00000468136 LURAP1LQ8IV03 231 aa7.14□□□□□ -1.27
MSH5-213ENST00000468136 DEFB104AQ8WTQ1 72 aa7.14□□□□□ -1.27
MSH5-213ENST00000468136 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
MSH5-213ENST00000468136 TM2D2Q9BX73 214 aa7.14□□□□□ -1.27
MSH5-213ENST00000468136 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
MSH5-213ENST00000468136 ICOSQ9Y6W8 199 aa7.14□□□□□ -1.27
MSH5-213ENST00000468136 LOC100131303A0A0U1RQF7 123 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 A6NJY4 79 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 F5H768 121 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 Q6ZVH6 145 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 LINC00469Q8N7U9 141 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 SPATA25Q9BR10 227 aa7.13□□□□□ -1.27
MSH5-213ENST00000468136 G3V4G9 280 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 GCSHP23434 173 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 CEMP1Q6PRD7 247 aaPredicted RBP7.12□□□□□ -1.27
MSH5-213ENST00000468136 SFTA2Q6UW10 78 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 CEND1Q8N111 149 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 LINC01561Q8N1V8 128 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 MAPKAPK5-AS1Q8N8E1 139 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 TP73-AS1Q9UF72 201 aa7.12□□□□□ -1.27
MSH5-213ENST00000468136 TMEM238C9JI98 176 aa7.11□□□□□ -1.27
MSH5-213ENST00000468136 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
MSH5-213ENST00000468136 LELP1Q5T871 98 aa7.11□□□□□ -1.27
MSH5-213ENST00000468136 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
MSH5-213ENST00000468136 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
MSH5-213ENST00000468136 CELA1Q9UNI1 258 aa7.11□□□□□ -1.27
MSH5-213ENST00000468136 TIMM17BO60830 172 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 PTTG1IPP53801 180 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 TCTAP57738 103 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 GAGE6Q13070 117 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 C12orf74Q32Q52 190 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
MSH5-213ENST00000468136 NIPBLQ6KC79 2804 aaeCLIP7.1□□□□□ -1.27
MSH5-213ENST00000468136 IGLV5-39A0A0G2JS06 123 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 A0A0J9YY99 117 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 A0A1B0GV90 55 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 DEFB4AO15263 64 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 HERV-K104P63124 156 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
MSH5-213ENST00000468136 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
MSH5-213ENST00000468136 TENM1Q9UKZ4 2725 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 TRAV13-1A0A0B4J241 112 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 TMEM262E9PQX1 116 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 CIRBPQ14011 172 aaKnown RBP7.08□□□□□ -1.28
MSH5-213ENST00000468136 SS18Q15532 418 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
MSH5-213ENST00000468136 TM2D3Q9BRN9 247 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 TTTY13Q9BZ97 58 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 CDKN2A-AS1Q9UH64 79 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 NDUFA12Q9UI09 145 aa7.08□□□□□ -1.28
MSH5-213ENST00000468136 NDUFA1O15239 70 aa7.07□□□□□ -1.28
MSH5-213ENST00000468136 RBX1P62877 108 aa7.07□□□□□ -1.28
MSH5-213ENST00000468136 C11orf45Q8TAV5 145 aa7.07□□□□□ -1.28
MSH5-213ENST00000468136 PPDPFQ9H3Y8 114 aa7.07□□□□□ -1.28
MSH5-213ENST00000468136 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
MSH5-213ENST00000468136 A0A096LPF7 62 aa7.06□□□□□ -1.28
MSH5-213ENST00000468136 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
MSH5-213ENST00000468136 TAX1BP3O14907 124 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms