RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 LAMA1P25391 3075 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 ADGRG4Q8IZF6 3080 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 SPTA1P02549 2419 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 TLN1Q9Y490 2541 aaKnown RBP0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 LAMA5O15230 3695 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 A0A1B0GX51 115 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 TMEM30CPA0ZSE6 113 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 APOC1P02654 83 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 SPINK13Q1W4C9 94 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 RPL13AP3Q6NVV1 102 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 SCIMPQ6UWF3 145 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 DMAC1Q96GE9 116 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 PFDN5Q99471 154 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 AIF1LQ9BQI0 150 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 MRPL36Q9P0J6 103 aaKnown RBP0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 PCNX1Q96RV3 2341 aa0.78□□□□□ -2.28
GAPVD1-211ENST00000467707 PCLOQ9Y6V0 5065 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 F8P00451 2351 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 ABCA2Q9BZC7 2435 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 PDZD2O15018 2839 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 LRBAP50851 2863 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 TRAV36DV7A0A075B6V5 113 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 IGHV1-24A0A0C4DH33 117 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 LOC100130705A0A1B0GUX0 176 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 TPST1O60507 370 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 TNFSF15O95150 251 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 APODP05090 189 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 SLC25A5P05141 298 aaKnown RBP0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 COX6B1P14854 86 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 HIST1H1BP16401 226 aaKnown RBP0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 GLYATL3Q5SZD4 288 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 OTOSQ8NHW6 89 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 C14orf144Q96I85 54 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 C12orf57Q99622 126 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 MUC22E2RYF6 1773 aaPredicted RBP0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 PATJQ8NI35 1801 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 MUC4Q99102 2169 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 URB1O60287 2271 aaKnown RBP0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 OTOGQ6ZRI0 2925 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 CSMD2Q7Z408 3487 aa0.77□□□□□ -2.29
GAPVD1-211ENST00000467707 SPENQ96T58 3664 aaKnown RBP0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 CRYBG3Q68DQ2 2970 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 MYH13Q9UKX3 1938 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 TSC2P49815 1807 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 NBPF19A0A087WUL8 3843 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 A0A0G2JMM0 328 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 DEGS1O15121 323 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 GNG7O60262 68 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 IFNGP01579 166 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 MPC1LP0DKB6 136 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 SDC4P31431 198 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 RRAS2P62070 204 aaPredicted RBP0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 HIST1H1AQ02539 215 aaPredicted RBP0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 MORN2Q502X0 79 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 LYPD5Q6UWN5 251 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 OR4S1Q8NGB4 309 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 TSC22D3Q99576 134 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 SMR3AQ99954 134 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 VPS25Q9BRG1 176 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 PLAC8Q9NZF1 115 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 METTL1Q9UBP6 276 aaKnown RBP0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 ERG28Q9UKR5 140 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 ZFHX3Q15911 3703 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 ITPR2Q14571 2701 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 NBEAL1Q6ZS30 2694 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 APC2O95996 2303 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 CACNA1EQ15878 2313 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 MED13LQ71F56 2210 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 PTPRDP23468 1912 aa0.76□□□□□ -2.29
GAPVD1-211ENST00000467707 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 PLIN4Q96Q06 1357 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 C9JAW5 83 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 SCTP09683 121 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 COX4I1P13073 169 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 S100PP25815 95 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 SPINK7P58062 85 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 EMX2Q04743 252 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 SNX29P2Q8IUI4 249 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 LZICQ8WZA0 190 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 MAGOHBQ96A72 148 aaKnown RBP0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 COMMD3Q9UBI1 195 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 HIGD1AQ9Y241 93 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 CELSR2Q9HCU4 2923 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 UBR4Q5T4S7 5183 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 CSMD1Q96PZ7 3565 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 NBEAL2Q6ZNJ1 2754 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 HIVEP1P15822 2718 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 MYH1P12882 1939 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 LRRK2Q5S007 2527 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 HIVEP3Q5T1R4 2406 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 HYDINQ4G0P3 5121 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 ACACAQ13085 2346 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 RYR3Q15413 4870 aa0.75□□□□□ -2.29
GAPVD1-211ENST00000467707 FLNCQ14315 2725 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 FLNAP21333 2647 aaKnown RBP0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 USP9YO00507 2555 aaPredicted RBP0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 MTORP42345 2549 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 PARP14Q460N5 1801 aa0.74□□□□□ -2.29
GAPVD1-211ENST00000467707 MT-ND4LP03901 98 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms