RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
BRAT1-203ENST00000467558 RS1O15537 224 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 PTPRBP23467 1997 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 DSPP15924 2871 aaKnown RBP10.19□□□□□ -0.78
BRAT1-203ENST00000467558 ACANP16112 2415 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 NDUFA7O95182 113 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 CXCL5P42830 114 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 LINC00467Q9BRT7 94 aa10.19□□□□□ -0.78
BRAT1-203ENST00000467558 TRAV26-1A0A087WT03 109 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 TAX1BP3O14907 124 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 COX8CQ7Z4L0 72 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 MYO15AQ9UKN7 3530 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 MIFP14174 115 aa10.18□□□□□ -0.78
BRAT1-203ENST00000467558 DAND5Q8N907 189 aa10.17□□□□□ -0.78
BRAT1-203ENST00000467558 CRYGDP07320 174 aa10.17□□□□□ -0.78
BRAT1-203ENST00000467558 HIST1H4AP62805 103 aaKnown RBP10.17□□□□□ -0.78
BRAT1-203ENST00000467558 H7C423 109 aa10.17□□□□□ -0.78
BRAT1-203ENST00000467558 POLR2KP53803 58 aaKnown RBP10.17□□□□□ -0.78
BRAT1-203ENST00000467558 H0YGX0 51 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 PROK1P58294 105 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 NDUFA1O15239 70 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 SPAG11BQ08648 103 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
BRAT1-203ENST00000467558 EDN2P20800 178 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 FREM2Q5SZK8 3169 aa10.16□□□□□ -0.78
BRAT1-203ENST00000467558 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.78
BRAT1-203ENST00000467558 TET2Q6N021 2002 aaPredicted RBP10.15□□□□□ -0.78
BRAT1-203ENST00000467558 ODF3L2Q3SX64 289 aa10.15□□□□□ -0.78
BRAT1-203ENST00000467558 SMR3AQ99954 134 aa10.15□□□□□ -0.78
BRAT1-203ENST00000467558 CDKN2A-AS1Q9UH64 79 aa10.15□□□□□ -0.78
BRAT1-203ENST00000467558 WFDC10AQ9H1F0 79 aa10.15□□□□□ -0.78
BRAT1-203ENST00000467558 ZNF22P17026 224 aaPredicted RBP10.14□□□□□ -0.79
BRAT1-203ENST00000467558 MIR7-3HGQ8N6C7 128 aa10.14□□□□□ -0.79
BRAT1-203ENST00000467558 GAS8-AS1O95177 125 aa10.13□□□□□ -0.79
BRAT1-203ENST00000467558 TRBV6-8A0A0A6YYG3 113 aa10.13□□□□□ -0.79
BRAT1-203ENST00000467558 BAALC-AS2P0C853 105 aa10.13□□□□□ -0.79
BRAT1-203ENST00000467558 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
BRAT1-203ENST00000467558 AKAP13Q12802 2813 aa10.13□□□□□ -0.79
BRAT1-203ENST00000467558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.13□□□□□ -0.79
BRAT1-203ENST00000467558 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 LINC00310P59036 64 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 TMEM126AQ9H061 195 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 TNRC18O15417 2968 aaPredicted RBP10.12□□□□□ -0.79
BRAT1-203ENST00000467558 TSHBP01222 138 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 ANKRD29Q8N6D5 301 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 LINC00269Q8N2A0 174 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 UBL5Q9BZL1 73 aa10.12□□□□□ -0.79
BRAT1-203ENST00000467558 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 MIAQ16674 131 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 ORMDL1Q9P0S3 153 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 PRM2P04554 102 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 REG3AQ06141 175 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 TM2D2Q9BX73 214 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 PKIGQ9Y2B9 76 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 BOD1L1Q8NFC6 3051 aa10.11□□□□□ -0.79
BRAT1-203ENST00000467558 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 IGLV1-51P01701 117 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 TIRAPP58753 221 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 LINC01620Q4KN68 170 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 RPL18AQ02543 176 aaKnown RBP10.1□□□□□ -0.79
BRAT1-203ENST00000467558 C16orf95Q9H693 158 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 MAP1AP78559 2803 aaPredicted RBP10.1□□□□□ -0.79
BRAT1-203ENST00000467558 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
BRAT1-203ENST00000467558 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
BRAT1-203ENST00000467558 UBE2BP63146 152 aa10.08□□□□□ -0.8
BRAT1-203ENST00000467558 IGHV4-28A0A0C4DH34 117 aa10.08□□□□□ -0.8
BRAT1-203ENST00000467558 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
BRAT1-203ENST00000467558 URB1-AS1Q96HZ7 61 aa10.08□□□□□ -0.8
BRAT1-203ENST00000467558 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
BRAT1-203ENST00000467558 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
BRAT1-203ENST00000467558 TEN1Q86WV5 123 aa10.07□□□□□ -0.8
BRAT1-203ENST00000467558 Q8N976 141 aa10.07□□□□□ -0.8
BRAT1-203ENST00000467558 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
BRAT1-203ENST00000467558 WFDC2Q14508 124 aa10.07□□□□□ -0.8
BRAT1-203ENST00000467558 CHCHD10Q8WYQ3 142 aaPredicted RBP10.07□□□□□ -0.8
BRAT1-203ENST00000467558 ETDCA0A1B0GVM5 59 aa10.06□□□□□ -0.8
BRAT1-203ENST00000467558 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
BRAT1-203ENST00000467558 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
BRAT1-203ENST00000467558 FAM110AQ9BQ89 295 aa10.06□□□□□ -0.8
BRAT1-203ENST00000467558 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
BRAT1-203ENST00000467558 RBX1P62877 108 aa10.05□□□□□ -0.8
BRAT1-203ENST00000467558 HAMPP81172 84 aa10.05□□□□□ -0.8
BRAT1-203ENST00000467558 FLNBO75369 2602 aaKnown RBP10.05□□□□□ -0.8
BRAT1-203ENST00000467558 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
BRAT1-203ENST00000467558 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
BRAT1-203ENST00000467558 MRPS36P82909 103 aaKnown RBP10.04□□□□□ -0.8
BRAT1-203ENST00000467558 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
BRAT1-203ENST00000467558 FRYQ5TBA9 3013 aa10.04□□□□□ -0.8
BRAT1-203ENST00000467558 H3BT86 120 aa10.03□□□□□ -0.8
BRAT1-203ENST00000467558 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
BRAT1-203ENST00000467558 Q8N2B8 174 aa10.03□□□□□ -0.8
BRAT1-203ENST00000467558 IL17DQ8TAD2 202 aa10.03□□□□□ -0.8
BRAT1-203ENST00000467558 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms