RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 PAX4O43316 350 aa7.57□□□□□ -1.2
PDZRN3-204ENST00000466348 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
PDZRN3-204ENST00000466348 AMMECR1LQ6DCA0 310 aa7.57□□□□□ -1.2
PDZRN3-204ENST00000466348 OR5A1Q8NGJ0 315 aa7.57□□□□□ -1.2
PDZRN3-204ENST00000466348 PLEKHB2Q96CS7 222 aa7.57□□□□□ -1.2
PDZRN3-204ENST00000466348 OPRPNQ99935 248 aaPredicted RBP7.57□□□□□ -1.2
PDZRN3-204ENST00000466348 TRAV8-6A0A0B4J262 113 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 TMEM223A0PJW6 202 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 LEPROTO15243 131 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 GYPEP15421 78 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 HINT1P49773 126 aaPredicted RBP7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 HERVK_113P63121 156 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 MPV17L2Q567V2 206 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 BVES-AS1Q5T3Y7 98 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 C11orf68Q9H3H3 251 aaKnown RBP7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 CDC42SE2Q9NRR3 84 aa7.56□□□□□ -1.2
PDZRN3-204ENST00000466348 IGLV5-45A0A087WSX0 123 aa7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 H3BNG1 76 aa7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 H3BRM9 83 aa7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 ZNF22P17026 224 aaPredicted RBP7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 UBE2D1P51668 147 aa7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 GEMIN7Q9H840 131 aaKnown RBP7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 TENM1Q9UKZ4 2725 aa7.55□□□□□ -1.2
PDZRN3-204ENST00000466348 LOC100131303A0A0U1RQF7 123 aa7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 A6NDN8 102 aa7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 BATFQ16520 125 aa7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 MRPL23Q16540 153 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 CEMP1Q6PRD7 247 aaPredicted RBP7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 Q6ZUT4 128 aa7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
PDZRN3-204ENST00000466348 J3QQQ9 107 aa7.53□□□□□ -1.2
PDZRN3-204ENST00000466348 CCL25O15444 150 aa7.53□□□□□ -1.2
PDZRN3-204ENST00000466348 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
PDZRN3-204ENST00000466348 KPRPQ5T749 579 aaPredicted RBP7.53□□□□□ -1.2
PDZRN3-204ENST00000466348 MAPKAPK5-AS1Q8N8E1 139 aa7.53□□□□□ -1.2
PDZRN3-204ENST00000466348 IGHV1-58A0A0C4DH39 117 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 ZNF815PA8K554 130 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 G3V4G9 280 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 TCTAP57738 103 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 LURAP1LQ8IV03 231 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 VSIG2Q96IQ7 327 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 CHCHD5Q9BSY4 110 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 TM2D2Q9BX73 214 aa7.52□□□□□ -1.21
PDZRN3-204ENST00000466348 VWFP04275 2813 aa7.51□□□□□ -1.21
PDZRN3-204ENST00000466348 F5H768 121 aa7.51□□□□□ -1.21
PDZRN3-204ENST00000466348 DEFB4AO15263 64 aa7.51□□□□□ -1.21
PDZRN3-204ENST00000466348 SPANXB1Q9NS25 103 aaPredicted RBP7.51□□□□□ -1.21
PDZRN3-204ENST00000466348 CELA1Q9UNI1 258 aa7.51□□□□□ -1.21
PDZRN3-204ENST00000466348 ICOSQ9Y6W8 199 aa7.51□□□□□ -1.21
PDZRN3-204ENST00000466348 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 SCGB1D4Q6XE38 83 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 CEND1Q8N111 149 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 SPATA25Q9BR10 227 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
PDZRN3-204ENST00000466348 A0A1B0GV90 55 aa7.49□□□□□ -1.21
PDZRN3-204ENST00000466348 C12orf74Q32Q52 190 aa7.49□□□□□ -1.21
PDZRN3-204ENST00000466348 HIST1H4GQ99525 98 aa7.49□□□□□ -1.21
PDZRN3-204ENST00000466348 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
PDZRN3-204ENST00000466348 A6NJY4 79 aa7.48□□□□□ -1.21
PDZRN3-204ENST00000466348 GAGE6Q13070 117 aa7.48□□□□□ -1.21
PDZRN3-204ENST00000466348 RNASE13Q5GAN3 156 aaKnown RBP7.48□□□□□ -1.21
PDZRN3-204ENST00000466348 LELP1Q5T871 98 aa7.48□□□□□ -1.21
PDZRN3-204ENST00000466348 FBN1P35555 2871 aaKnown RBP7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 A0A0J9YY99 117 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 SRSF9Q13242 221 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 ZFAND6Q6FIF0 208 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 Q6ZVH6 145 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
PDZRN3-204ENST00000466348 TMEM238C9JI98 176 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 TMEM262E9PQX1 116 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 TIMM17BO60830 172 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 SMIM13P0DJ93 91 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 GCSHP23434 173 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 PTTG1IPP53801 180 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 SFTA2Q6UW10 78 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 TM2D3Q9BRN9 247 aa7.46□□□□□ -1.22
PDZRN3-204ENST00000466348 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
PDZRN3-204ENST00000466348 TSPEAR-AS2P59090 65 aa7.45□□□□□ -1.22
PDZRN3-204ENST00000466348 RBX1P62877 108 aa7.45□□□□□ -1.22
PDZRN3-204ENST00000466348 SS18Q15532 418 aa7.45□□□□□ -1.22
PDZRN3-204ENST00000466348 C11orf45Q8TAV5 145 aa7.45□□□□□ -1.22
PDZRN3-204ENST00000466348 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
PDZRN3-204ENST00000466348 STAB1Q9NY15 2570 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 A0A096LPF7 62 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 NDUFA1O15239 70 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 HTN3P15516 51 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 HERV-K104P63124 156 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 COX6A2Q02221 97 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms