RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 Q8N3U1 123 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 C20orf78Q9BR46 151 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 RHODO00212 210 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 TNFRSF6BO95407 300 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 LINC00315P59091 139 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 SCRT2Q9NQ03 307 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 Q9UF83 564 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 TNFRSF18Q9Y5U5 241 aa6.65□□□□□ -1.34
RTFDC1-205ENST00000466260 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.35
RTFDC1-205ENST00000466260 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 A6NDN8 102 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 MGPP08493 103 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 ATOH7Q8N100 152 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 AP1S3Q96PC3 154 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 DPH3P1Q9H4G8 78 aa6.64□□□□□ -1.35
RTFDC1-205ENST00000466260 LOC389332A0A1B0GUA5 103 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 NPYP01303 97 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 IGHV3-30P01768 117 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 IGHV3-33P01772 117 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 CRYGDP07320 174 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 IGHV3-30-3P0DP02 117 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 IGHV3-30-5P0DP03 117 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 EVI2AP22794 236 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 RPL32P62910 135 aaKnown RBP6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 LAGE3Q14657 143 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 PIK3CD-AS1Q5SR53 167 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 UFSP1Q6NVU6 142 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 SH2D6Q7Z4S9 175 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 BOD1L2Q8IYS8 172 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 RNF185Q96GF1 192 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 COX11Q9Y6N1 276 aa6.63□□□□□ -1.35
RTFDC1-205ENST00000466260 TRAV8-6A0A0B4J262 113 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 F5H697 171 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 PLNP26678 52 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 GTSF1LQ9H1H1 148 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
RTFDC1-205ENST00000466260 IGHV3-38A0A0C4DH36 116 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 DPM2O94777 84 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 HINT1P49773 126 aaPredicted RBP6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 HSD52Q0P140 79 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 PAPPA-AS1Q5QFB9 102 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 LELP1Q5T871 98 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
RTFDC1-205ENST00000466260 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 H0Y8G0 127 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 IGKCP01834 107 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 PRSS1P07477 247 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 LINC00694P0DN24 101 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 Q9HAA7 133 aa6.6□□□□□ -1.35
RTFDC1-205ENST00000466260 A0A096LNJ9 63 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 FUSP35637 526 aaKnown RBP eCLIP6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 TIRAPP58753 221 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 BVES-AS1Q5T3Y7 98 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 LINC00173Q6ZV60 143 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 STPG4Q8N801 248 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 NEXN-AS1Q8NBZ9 246 aa6.59□□□□□ -1.35
RTFDC1-205ENST00000466260 NCR2O95944 276 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 TAL2Q16559 108 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 C10orf126Q8N4M7 172 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 NRACQ8N912 160 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 PKD1P98161 4303 aa6.58□□□□□ -1.36
RTFDC1-205ENST00000466260 TRBV7-3A0A075B6L6 115 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 TRBV10-1A0A0K0K1A3 114 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 C16orf90A8MZG2 172 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 H7C1H1 209 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 PSCAO43653 123 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 UBE2D3P61077 147 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 UBE2D2P62837 147 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 ODF1Q14990 250 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 LINC01556Q5JQF7 62 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 GTF2H5Q6ZYL4 71 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 ERASQ7Z444 233 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 DAZ4Q86SG3 579 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 NFE4Q86UQ8 179 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 DEFB104AQ8WTQ1 72 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 DAZ3Q9NR90 486 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 KIF25-AS1Q9Y6Z4 181 aa6.57□□□□□ -1.36
RTFDC1-205ENST00000466260 A0A087WX48 190 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 F8VRH5 84 aa6.56□□□□□ -1.36
RTFDC1-205ENST00000466260 SMKR1H3BMG3 65 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms