RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 SLC25A29Q8N8R3 303 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 CSDC2Q9Y534 153 aaKnown RBP13.06□□□□□ -0.32
LETM1-202ENST00000466175 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.06□□□□□ -0.32
LETM1-202ENST00000466175 A0A1B0GWB2 263 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 IGKV2-29A2NJV5 120 aaPredicted RBP13.06□□□□□ -0.32
LETM1-202ENST00000466175 GAGE10A6NGK3 116 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 SMIM9A6NGZ8 99 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 RAB37Q96AX2 223 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 GTSF1LQ9H1H1 148 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 A0A1W2PPM0 123 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 GAGE12BA1L429 117 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 GAGE7O76087 117 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 GAGE12FP0CL80 117 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 GAGE12GP0CL81 117 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 GAGE12IP0CL82 117 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
LETM1-202ENST00000466175 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 OR5A1Q8NGJ0 315 aa13.05□□□□□ -0.32
LETM1-202ENST00000466175 A0A0J9YY99 117 aa13.04□□□□□ -0.32
LETM1-202ENST00000466175 FABP2P12104 132 aa13.04□□□□□ -0.32
LETM1-202ENST00000466175 C12orf74Q32Q52 190 aa13.04□□□□□ -0.32
LETM1-202ENST00000466175 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
LETM1-202ENST00000466175 K7EP13 123 aa13.03□□□□□ -0.32
LETM1-202ENST00000466175 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
LETM1-202ENST00000466175 KIR2DL5BQ8NHK3 375 aa13.03□□□□□ -0.32
LETM1-202ENST00000466175 MGAM2Q2M2H8 2515 aa13.03□□□□□ -0.32
LETM1-202ENST00000466175 H7C423 109 aa13.02□□□□□ -0.32
LETM1-202ENST00000466175 K7EP34 96 aa13.02□□□□□ -0.32
LETM1-202ENST00000466175 TSPEAR-AS2P59090 65 aa13.02□□□□□ -0.32
LETM1-202ENST00000466175 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
LETM1-202ENST00000466175 TIRAPP58753 221 aa13.02□□□□□ -0.33
LETM1-202ENST00000466175 Q6ZUT4 128 aa13.02□□□□□ -0.33
LETM1-202ENST00000466175 TRRAPQ9Y4A5 3859 aa13.02□□□□□ -0.33
LETM1-202ENST00000466175 NBEAL1Q6ZS30 2694 aa13.01□□□□□ -0.33
LETM1-202ENST00000466175 UBE2D1P51668 147 aa13.01□□□□□ -0.33
LETM1-202ENST00000466175 GEMIN7Q9H840 131 aaKnown RBP13.01□□□□□ -0.33
LETM1-202ENST00000466175 IGHV1-58A0A0C4DH39 117 aa13□□□□□ -0.33
LETM1-202ENST00000466175 GAGE12JA6NER3 117 aa13□□□□□ -0.33
LETM1-202ENST00000466175 GAGE4Q13068 117 aa13□□□□□ -0.33
LETM1-202ENST00000466175 GAGE5Q13069 117 aa13□□□□□ -0.33
LETM1-202ENST00000466175 GAGE13Q4V321 117 aa13□□□□□ -0.33
LETM1-202ENST00000466175 FAM19A3Q7Z5A8 133 aa13□□□□□ -0.33
LETM1-202ENST00000466175 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
LETM1-202ENST00000466175 LINC00612Q8N6U2 182 aa13□□□□□ -0.33
LETM1-202ENST00000466175 K7ERJ3 54 aa12.99□□□□□ -0.33
LETM1-202ENST00000466175 TMEM243Q9BU79 118 aa12.99□□□□□ -0.33
LETM1-202ENST00000466175 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
LETM1-202ENST00000466175 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 IGLL5B9A064 214 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 IGHV3-30-3P0DP02 117 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 APOC4P55056 127 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 HERVK_113P63121 156 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 FHL2Q14192 279 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
LETM1-202ENST00000466175 TMEM238C9JI98 176 aa12.97□□□□□ -0.33
LETM1-202ENST00000466175 UBE2L6O14933 153 aa12.97□□□□□ -0.33
LETM1-202ENST00000466175 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
LETM1-202ENST00000466175 IGHV3-30P01768 117 aa12.96□□□□□ -0.33
LETM1-202ENST00000466175 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.33
LETM1-202ENST00000466175 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
LETM1-202ENST00000466175 TMEM101Q96IK0 257 aa12.96□□□□□ -0.33
LETM1-202ENST00000466175 VSIG2Q96IQ7 327 aa12.96□□□□□ -0.33
LETM1-202ENST00000466175 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.33
LETM1-202ENST00000466175 WIPF1O43516 503 aa12.95□□□□□ -0.34
LETM1-202ENST00000466175 NAA38Q9BRA0 125 aaKnown RBP12.95□□□□□ -0.34
LETM1-202ENST00000466175 X6R8D5 127 aa12.95□□□□□ -0.34
LETM1-202ENST00000466175 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
LETM1-202ENST00000466175 LINC00694P0DN24 101 aa12.94□□□□□ -0.34
LETM1-202ENST00000466175 CDC42SE2Q9NRR3 84 aa12.94□□□□□ -0.34
LETM1-202ENST00000466175 IGHV3-64A0A075B6Q5 118 aa12.93□□□□□ -0.34
LETM1-202ENST00000466175 A0A0J9YXY3 114 aa12.92□□□□□ -0.34
LETM1-202ENST00000466175 RPL24P83731 157 aaKnown RBP12.92□□□□□ -0.34
LETM1-202ENST00000466175 NDUFA12Q9UI09 145 aa12.91□□□□□ -0.34
LETM1-202ENST00000466175 FBN3Q75N90 2809 aa12.91□□□□□ -0.34
LETM1-202ENST00000466175 NOTCH1P46531 2555 aa12.91□□□□□ -0.34
LETM1-202ENST00000466175 ZFAND6Q6FIF0 208 aa12.91□□□□□ -0.34
LETM1-202ENST00000466175 C10orf126Q8N4M7 172 aa12.91□□□□□ -0.34
LETM1-202ENST00000466175 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
LETM1-202ENST00000466175 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
LETM1-202ENST00000466175 TRAV8-3A0A0A6YYJ7 113 aa12.9□□□□□ -0.34
LETM1-202ENST00000466175 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
LETM1-202ENST00000466175 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
LETM1-202ENST00000466175 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
LETM1-202ENST00000466175 TIMM17BO60830 172 aa12.89□□□□□ -0.35
LETM1-202ENST00000466175 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
LETM1-202ENST00000466175 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
LETM1-202ENST00000466175 LYRM7Q5U5X0 104 aa12.89□□□□□ -0.35
LETM1-202ENST00000466175 IGLV5-39A0A0G2JS06 123 aa12.88□□□□□ -0.35
LETM1-202ENST00000466175 SPANXDQ9BXN6 97 aa12.88□□□□□ -0.35
LETM1-202ENST00000466175 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
LETM1-202ENST00000466175 SPANXCQ9NY87 97 aa12.88□□□□□ -0.35
LETM1-202ENST00000466175 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.88□□□□□ -0.35
LETM1-202ENST00000466175 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
LETM1-202ENST00000466175 NDUFA1O15239 70 aa12.87□□□□□ -0.35
LETM1-202ENST00000466175 A0A0B4J2C4 111 aa12.85□□□□□ -0.35
LETM1-202ENST00000466175 APOMO95445 188 aa12.85□□□□□ -0.35
LETM1-202ENST00000466175 CFC1BP0CG36 223 aa12.85□□□□□ -0.35
LETM1-202ENST00000466175 CFC1P0CG37 223 aa12.85□□□□□ -0.35
LETM1-202ENST00000466175 MIFP14174 115 aa12.85□□□□□ -0.35
LETM1-202ENST00000466175 COX6A2Q02221 97 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms