RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ERC2-IT1O76042 136 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 DNAL4O96015 105 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 FXYD7P58549 80 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 KIAA2026Q5HYC2 2103 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 SOSTDC1Q6X4U4 206 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 FAM223AQ8IWN6 122 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 DYNAPQ8N1N2 210 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 LINC00269Q8N2A0 174 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 Q8NAQ8 132 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 SCGB3A1Q96QR1 104 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 B9D2Q9BPU9 175 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 TMEM167BQ9NRX6 74 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 LINC00474Q9P2X8 69 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 BCORQ6W2J9 1755 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 ATG2BQ96BY7 2078 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 TNS1Q9HBL0 1735 aaKnown RBP1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 TRPM6Q9BX84 2022 aa1.71□□□□□ -2.14
HMGXB4-205ENST00000464480 EML6Q6ZMW3 1958 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 KIAA1549Q9HCM3 1950 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 COL18A1P39060 1754 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 IGKV1D-37A0A075B6S9 117 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 IGLV3-32A0A0A0MS00 114 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 A6NN06 94 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 F8WEM9 126 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 C3orf84H3BNL1 204 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 LEPROTO15243 131 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 PPP1R17O96001 155 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 CTSGP08311 255 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 MIFP14174 115 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 RPL27AP46776 148 aaKnown RBP1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 EDDM3BP56851 147 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 KISS1Q15726 138 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 RPS27LQ71UM5 84 aaKnown RBP1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 FAM167A-AS1Q96KT0 104 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 WFDC6Q9BQY6 131 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 LINC00467Q9BRT7 94 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 LIMD2Q9BT23 127 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 CYSTM1Q9H1C7 97 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 PLXNB1O43157 2135 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 MYO7AQ13402 2215 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 GREB1Q4ZG55 1949 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 PLXNB3Q9ULL4 1909 aa1.7□□□□□ -2.14
HMGXB4-205ENST00000464480 PLXNA3P51805 1871 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 TRAV12-1A0A0B4J245 112 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 FAM223BA6NKX1 122 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 HIGD1CA8MV81 97 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 SPINK4O60575 86 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 IGHV3-33P01772 117 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 IGKV1-16P04430 117 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 NPPCP23582 126 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 BSPH1Q075Z2 132 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 LYPD5Q6UWN5 251 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 PATE2Q6UY27 113 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 Q8N6K4 173 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 SPTSSBQ8NFR3 76 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 CCL4L1Q8NHW4 92 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 PSENENQ9NZ42 101 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 NDUFA12Q9UI09 145 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 UBE2D4Q9Y2X8 147 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 TIMM8BQ9Y5J9 83 aaPredicted RBP1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 MGAMO43451 1857 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 CD163L1Q9NR16 1453 aa1.69□□□□□ -2.14
HMGXB4-205ENST00000464480 NCOA6Q14686 2063 aaPredicted RBP1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 A0A1W2PNM2 257 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 CPSF4LA6NMK7 179 aaKnown RBP1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 GNRH2O43555 120 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 ZNF22P17026 224 aaPredicted RBP1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 SPINT3P49223 89 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 C9orf116Q5BN46 136 aaPredicted RBP1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 CASC2Q6XLA1 102 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 RETNLBQ9BQ08 111 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 UBR3Q6ZT12 1888 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 NUP98P52948 1817 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 MYO9BQ13459 2157 aa1.68□□□□□ -2.14
HMGXB4-205ENST00000464480 PCDH15Q96QU1 1955 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 TANC2Q9HCD6 1990 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 IGKV2D-26A0A0A0MRZ7 120 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 A0A1B0GUT8 65 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 hDV103S1A0JD37 113 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 SDHAF1A6NFY7 115 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 TMEM14DPA8MWL7 114 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 D6R8Y8 96 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 HCG22E2RYF7 251 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 F8VRH5 84 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 K7EMI3 77 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 LECT2O14960 151 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 ARL14EPLP0DKL9 152 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 FXYD3Q14802 87 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 KRTAP13-1Q8IUC0 172 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 MUSTN1Q8IVN3 82 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 LCTP09848 1927 aa1.67□□□□□ -2.14
HMGXB4-205ENST00000464480 KIAA1549LQ6ZVL6 1849 aa1.66□□□□□ -2.14
HMGXB4-205ENST00000464480 PTPRSQ13332 1948 aa1.66□□□□□ -2.14
HMGXB4-205ENST00000464480 TRAV23DV6A0A075B6W5 121 aa1.66□□□□□ -2.14
HMGXB4-205ENST00000464480 TRBV6-8A0A0A6YYG3 113 aa1.66□□□□□ -2.14
HMGXB4-205ENST00000464480 TRAV22A0A0B4J277 110 aa1.66□□□□□ -2.14
HMGXB4-205ENST00000464480 LINC01546A6NGU7 62 aa1.66□□□□□ -2.14
HMGXB4-205ENST00000464480 C11orf86A6NJI1 115 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms