RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CYSRT1A8MQ03 144 aa15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 RPL24P83731 157 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 GAGE13Q4V321 117 aa15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 IGHV3-38A0A0C4DH36 116 aa15.5■□□□□ 0.07
PDLIM2-216ENST00000464275 TMEM223A0PJW6 202 aa15.5■□□□□ 0.07
PDLIM2-216ENST00000464275 EMP1P54849 157 aa15.5■□□□□ 0.07
PDLIM2-216ENST00000464275 VCX2Q9H322 139 aa15.49■□□□□ 0.07
PDLIM2-216ENST00000464275 AMELXQ99217 191 aa15.49■□□□□ 0.07
PDLIM2-216ENST00000464275 TEX48A0A1B0GUV7 120 aa15.48■□□□□ 0.07
PDLIM2-216ENST00000464275 SMIM9A6NGZ8 99 aa15.48■□□□□ 0.07
PDLIM2-216ENST00000464275 H3BMG7 143 aa15.48■□□□□ 0.07
PDLIM2-216ENST00000464275 IGHV3-30P01768 117 aa15.48■□□□□ 0.07
PDLIM2-216ENST00000464275 IGHV3-30-5P0DP03 117 aa15.48■□□□□ 0.07
PDLIM2-216ENST00000464275 SPANXA1Q9NS26 97 aa15.48■□□□□ 0.07
PDLIM2-216ENST00000464275 WIPF1O43516 503 aa15.47■□□□□ 0.07
PDLIM2-216ENST00000464275 TSPEAR-AS2P59090 65 aa15.47■□□□□ 0.07
PDLIM2-216ENST00000464275 TEP1Q99973 2627 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-216ENST00000464275 KIR2DL5BQ8NHK3 375 aa15.47■□□□□ 0.07
PDLIM2-216ENST00000464275 DAZ4Q86SG3 579 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-216ENST00000464275 DAZ3Q9NR90 486 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-216ENST00000464275 PRO0461Q9UI25 63 aa15.46■□□□□ 0.07
PDLIM2-216ENST00000464275 UBE2D4Q9Y2X8 147 aa15.46■□□□□ 0.07
PDLIM2-216ENST00000464275 ZNF22P17026 224 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 UBE2D3P61077 147 aa15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 UBE2D2P62837 147 aa15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 TRBV6-4A0A1B0GX49 114 aa15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 IGKV2-29A2NJV5 120 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 FAM104AQ969W3 186 aa15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 X6R8D5 127 aa15.45■□□□□ 0.06
PDLIM2-216ENST00000464275 TSPAN13O95857 204 aa15.44■□□□□ 0.06
PDLIM2-216ENST00000464275 APOC4P55056 127 aa15.44■□□□□ 0.06
PDLIM2-216ENST00000464275 WFDC2Q14508 124 aa15.44■□□□□ 0.06
PDLIM2-216ENST00000464275 TRGV4A0A0C4DH28 118 aa15.44■□□□□ 0.06
PDLIM2-216ENST00000464275 TRBV20-1A0A075B6N2 111 aa15.43■□□□□ 0.06
PDLIM2-216ENST00000464275 GAGE12JA6NER3 117 aa15.43■□□□□ 0.06
PDLIM2-216ENST00000464275 GAGE4Q13068 117 aa15.43■□□□□ 0.06
PDLIM2-216ENST00000464275 GAGE5Q13069 117 aa15.43■□□□□ 0.06
PDLIM2-216ENST00000464275 KRTAP24-1Q3LI83 254 aa15.43■□□□□ 0.06
PDLIM2-216ENST00000464275 ATP6V0E2Q8NHE4 81 aa15.43■□□□□ 0.06
PDLIM2-216ENST00000464275 MRPS36P82909 103 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 CEMP1Q6PRD7 247 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 LINC00612Q8N6U2 182 aa15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 TIMM21Q9BVV7 248 aa15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 TENM1Q9UKZ4 2725 aa15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 TMEM238C9JI98 176 aa15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 C10orf126Q8N4M7 172 aa15.42■□□□□ 0.06
PDLIM2-216ENST00000464275 FHL2Q14192 279 aa15.41■□□□□ 0.06
PDLIM2-216ENST00000464275 ATRQ13535 2644 aa15.41■□□□□ 0.06
PDLIM2-216ENST00000464275 A0A0J9YXV3 536 aa15.4■□□□□ 0.06
PDLIM2-216ENST00000464275 APOMO95445 188 aa15.4■□□□□ 0.06
PDLIM2-216ENST00000464275 PRO1854Q9UHT4 67 aa15.4■□□□□ 0.06
PDLIM2-216ENST00000464275 CFC1BP0CG36 223 aa15.39■□□□□ 0.05
PDLIM2-216ENST00000464275 CFC1P0CG37 223 aa15.39■□□□□ 0.05
PDLIM2-216ENST00000464275 GTSF1LQ9H1H1 148 aa15.38■□□□□ 0.05
PDLIM2-216ENST00000464275 VWFP04275 2813 aa15.38■□□□□ 0.05
PDLIM2-216ENST00000464275 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-216ENST00000464275 A0A0B4J2C4 111 aa15.38■□□□□ 0.05
PDLIM2-216ENST00000464275 NTM-AS1Q6ZSK4 140 aa15.38■□□□□ 0.05
PDLIM2-216ENST00000464275 Q6ZUT4 128 aa15.38■□□□□ 0.05
PDLIM2-216ENST00000464275 LOC107984156A0A0G2JMH3 177 aa15.37■□□□□ 0.05
PDLIM2-216ENST00000464275 TINCRA0A1B0GVN0 87 aa15.37■□□□□ 0.05
PDLIM2-216ENST00000464275 DEFB130BP0DP73 79 aa15.37■□□□□ 0.05
PDLIM2-216ENST00000464275 DEFB130AP0DP74 79 aa15.37■□□□□ 0.05
PDLIM2-216ENST00000464275 ETDBQ3ZM63 59 aa15.37■□□□□ 0.05
PDLIM2-216ENST00000464275 ARL17AQ8IVW1 177 aa15.37■□□□□ 0.05
PDLIM2-216ENST00000464275 SMAGPQ0VAQ4 97 aa15.36■□□□□ 0.05
PDLIM2-216ENST00000464275 DEFB135Q30KP9 77 aa15.36■□□□□ 0.05
PDLIM2-216ENST00000464275 DGAT2L7PQ6IED9 249 aa15.36■□□□□ 0.05
PDLIM2-216ENST00000464275 LOC100131303A0A0U1RQF7 123 aa15.36■□□□□ 0.05
PDLIM2-216ENST00000464275 RNASE13Q5GAN3 156 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-216ENST00000464275 SBSPONQ8IVN8 264 aa15.36■□□□□ 0.05
PDLIM2-216ENST00000464275 LYRM9A8MSI8 78 aa15.35■□□□□ 0.05
PDLIM2-216ENST00000464275 CSDC2Q9Y534 153 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-216ENST00000464275 MAST4O15021 2626 aa15.34■□□□□ 0.05
PDLIM2-216ENST00000464275 IGHV1-58A0A0C4DH39 117 aa15.34■□□□□ 0.05
PDLIM2-216ENST00000464275 IGHV3-30-3P0DP02 117 aa15.34■□□□□ 0.05
PDLIM2-216ENST00000464275 PSMB2P49721 201 aa15.34■□□□□ 0.05
PDLIM2-216ENST00000464275 SCGB1A1P11684 91 aa15.33■□□□□ 0.05
PDLIM2-216ENST00000464275 SH2D6Q7Z4S9 175 aa15.33■□□□□ 0.05
PDLIM2-216ENST00000464275 C3orf56Q8N813 242 aa15.33■□□□□ 0.05
PDLIM2-216ENST00000464275 SPATA25Q9BR10 227 aa15.33■□□□□ 0.05
PDLIM2-216ENST00000464275 A0A0J9YXY3 114 aa15.33■□□□□ 0.04
PDLIM2-216ENST00000464275 A4D1N5 150 aa15.32■□□□□ 0.04
PDLIM2-216ENST00000464275 LINC00694P0DN24 101 aa15.32■□□□□ 0.04
PDLIM2-216ENST00000464275 IGHV4-30-4P0DP06 118 aa15.32■□□□□ 0.04
PDLIM2-216ENST00000464275 SHISA2Q6UWI4 295 aa15.32■□□□□ 0.04
PDLIM2-216ENST00000464275 TMEM243Q9BU79 118 aa15.32■□□□□ 0.04
PDLIM2-216ENST00000464275 FAM222AQ5U5X8 452 aa15.31■□□□□ 0.04
PDLIM2-216ENST00000464275 H7C423 109 aa15.31■□□□□ 0.04
PDLIM2-216ENST00000464275 M0QXV9 152 aa15.31■□□□□ 0.04
PDLIM2-216ENST00000464275 SIGMAR1Q99720 223 aa15.31■□□□□ 0.04
PDLIM2-216ENST00000464275 GAGE12HA6NDE8 117 aa15.3■□□□□ 0.04
PDLIM2-216ENST00000464275 UBE2L6O14933 153 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 IGHV3-33P01772 117 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 MIFP14174 115 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 SPANXDQ9BXN6 97 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 SPANXCQ9NY87 97 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 IGHV4-28A0A0C4DH34 117 aa15.29■□□□□ 0.04
PDLIM2-216ENST00000464275 MUSTN1Q8IVN3 82 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms