RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 C5orf38Q86SI9 138 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 CASZ1Q86V15 1759 aa1.36□□□□□ -2.19
HERC4-208ENST00000463478 CTTNBP2Q8WZ74 1663 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 EHBP1L1Q8N3D4 1523 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 PHLPP1O60346 1717 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 PEAK1Q9H792 1746 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 AKAP11Q9UKA4 1901 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 TRBV7-1A0A0A6YYK4 115 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 H3BQ15 152 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 IFITM1P13164 125 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 CCL3L1P16619 93 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 UBE2D1P51668 147 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 ACBD7Q8N6N7 88 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 LINC00208Q96KT6 92 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 TMEM14BQ9NUH8 114 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 CHD7Q9P2D1 2997 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 NINQ8N4C6 2090 aa1.35□□□□□ -2.19
HERC4-208ENST00000463478 MYH13Q9UKX3 1938 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 APC2O95996 2303 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 DMDP11532 3685 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 SPEF2Q9C093 1822 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 TRAV13-2A0A0B4J235 113 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
HERC4-208ENST00000463478 TECTAO75443 2155 aa1.34□□□□□ -2.2
HERC4-208ENST00000463478 CHD3Q12873 2000 aaKnown RBP1.33□□□□□ -2.2
HERC4-208ENST00000463478 ALKQ9UM73 1620 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 DOPEY2Q9Y3R5 2298 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 VPS8Q8N3P4 1428 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 CSPG4Q6UVK1 2322 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 MYH6P13533 1939 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 PTPRDP23468 1912 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 UBE2L5PA0A1B0GUS4 154 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 TMEM218A2RU14 115 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 PRB4P10163 310 aaPredicted RBP1.33□□□□□ -2.2
HERC4-208ENST00000463478 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
HERC4-208ENST00000463478 DCDP81605 110 aaKnown RBP1.33□□□□□ -2.2
HERC4-208ENST00000463478 HSD52Q0P140 79 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 COMMD6Q7Z4G1 85 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 SPTSSBQ8NFR3 76 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 COX7B2Q8TF08 81 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 LAMB1P07942 1786 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 FOCADQ5VW36 1801 aa1.33□□□□□ -2.2
HERC4-208ENST00000463478 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
HERC4-208ENST00000463478 ZNF142P52746 1687 aaPredicted RBP1.32□□□□□ -2.2
HERC4-208ENST00000463478 PXDNQ92626 1479 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 CNTRLQ7Z7A1 2325 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 HCG22E2RYF7 251 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 S100A8P05109 93 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 C20orf197Q8N268 126 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 TET1Q8NFU7 2136 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 C10orf82Q8WW14 230 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 SCP2D1Q9UJQ7 156 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 PHRF1Q9P1Y6 1649 aaKnown RBP1.32□□□□□ -2.2
HERC4-208ENST00000463478 KMT2DO14686 5537 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 CHD9Q3L8U1 2897 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 EML5Q05BV3 1969 aa1.32□□□□□ -2.2
HERC4-208ENST00000463478 ADGRG4Q8IZF6 3080 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 PZPP20742 1482 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 PLXNA2O75051 1894 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 RB1CC1Q8TDY2 1594 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 TRAV30A0A087WSZ9 112 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 OOSP1A8MZH6 123 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 FXYD1O00168 92 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 ELOF1P60002 83 aaKnown RBP1.31□□□□□ -2.2
HERC4-208ENST00000463478 RBM3P98179 157 aaKnown RBP1.31□□□□□ -2.2
HERC4-208ENST00000463478 S100A7L2Q5SY68 101 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 Q86TA4 180 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 DSCR8Q96T75 97 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 V9GYV3 84 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 E9PCH4 1651 aa1.31□□□□□ -2.2
HERC4-208ENST00000463478 CPSF1Q10570 1443 aaKnown RBP1.31□□□□□ -2.2
HERC4-208ENST00000463478 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
HERC4-208ENST00000463478 KIAA0556O60303 1618 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 PREX1Q8TCU6 1659 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 QRICH2Q9H0J4 1663 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 A0A096LNT2 108 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 TMEM262E9PQX1 116 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 TFF1P04155 84 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 INSL4Q14641 139 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 KMT2AQ03164 3969 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 DIP2BQ9P265 1576 aa1.3□□□□□ -2.2
HERC4-208ENST00000463478 DLEC1Q9Y238 1755 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 SPINK8P0C7L1 97 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 TTC9CQ8N5M4 171 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 MYOZ3Q8TDC0 251 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 DPH3P1Q9H4G8 78 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 LINC00312Q9Y6C7 94 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 MED13LQ71F56 2210 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 CCNB3Q8WWL7 1395 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 CUX1P39880 1505 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 WIZO95785 1651 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 MGAQ8IWI9 3026 aa1.29□□□□□ -2.2
HERC4-208ENST00000463478 K7EIL1 84 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 EDDM3BP56851 147 aa1.28□□□□□ -2.2
HERC4-208ENST00000463478 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
HERC4-208ENST00000463478 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms