RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
COL5A3-202ENST00000461214 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
COL5A3-202ENST00000461214 BTF3P20290 206 aaKnown RBP9.75□□□□□ -0.85
COL5A3-202ENST00000461214 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
COL5A3-202ENST00000461214 OR5A1Q8NGJ0 315 aa9.75□□□□□ -0.85
COL5A3-202ENST00000461214 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
COL5A3-202ENST00000461214 HSBP1O75506 76 aa9.74□□□□□ -0.85
COL5A3-202ENST00000461214 SERF1AO75920 110 aa9.74□□□□□ -0.85
COL5A3-202ENST00000461214 ANGP03950 147 aaKnown RBP9.74□□□□□ -0.85
COL5A3-202ENST00000461214 LINC00310P59036 64 aa9.74□□□□□ -0.85
COL5A3-202ENST00000461214 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
COL5A3-202ENST00000461214 Q8N976 141 aa9.74□□□□□ -0.85
COL5A3-202ENST00000461214 A0A096LNJ9 63 aa9.73□□□□□ -0.85
COL5A3-202ENST00000461214 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
COL5A3-202ENST00000461214 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
COL5A3-202ENST00000461214 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
COL5A3-202ENST00000461214 Q6ZR54 194 aa9.73□□□□□ -0.85
COL5A3-202ENST00000461214 Q8N3U1 123 aa9.73□□□□□ -0.85
COL5A3-202ENST00000461214 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
COL5A3-202ENST00000461214 IGLV4-60A0A075B6I1 120 aa9.72□□□□□ -0.85
COL5A3-202ENST00000461214 CRPP02741 224 aa9.72□□□□□ -0.85
COL5A3-202ENST00000461214 PAPPA-AS1Q5QFB9 102 aa9.72□□□□□ -0.85
COL5A3-202ENST00000461214 KRTAP1-5Q9BYS1 174 aa9.72□□□□□ -0.85
COL5A3-202ENST00000461214 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
COL5A3-202ENST00000461214 ERASQ7Z444 233 aa9.71□□□□□ -0.86
COL5A3-202ENST00000461214 CDC42SE2Q9NRR3 84 aa9.71□□□□□ -0.86
COL5A3-202ENST00000461214 KLK12Q9UKR0 248 aa9.71□□□□□ -0.86
COL5A3-202ENST00000461214 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 IGIPA6NJ69 53 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 REG3AQ06141 175 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 MIAQ16674 131 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 PDZD11Q5EBL8 140 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 Q6ZN92 141 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 Q6ZUT4 128 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
COL5A3-202ENST00000461214 IGLV4-3A0A075B6K6 122 aa9.69□□□□□ -0.86
COL5A3-202ENST00000461214 A0A1B0GVY2 172 aa9.69□□□□□ -0.86
COL5A3-202ENST00000461214 ATP5LO75964 103 aa9.69□□□□□ -0.86
COL5A3-202ENST00000461214 PMCHL1Q16048 86 aa9.69□□□□□ -0.86
COL5A3-202ENST00000461214 LINC00269Q8N2A0 174 aa9.69□□□□□ -0.86
COL5A3-202ENST00000461214 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
COL5A3-202ENST00000461214 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
COL5A3-202ENST00000461214 NDUFA6P56556 154 aa9.68□□□□□ -0.86
COL5A3-202ENST00000461214 LINC00336Q6ZUF6 198 aa9.68□□□□□ -0.86
COL5A3-202ENST00000461214 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
COL5A3-202ENST00000461214 RMI2Q96E14 147 aa9.68□□□□□ -0.86
COL5A3-202ENST00000461214 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
COL5A3-202ENST00000461214 CCL25O15444 150 aa9.67□□□□□ -0.86
COL5A3-202ENST00000461214 ENHOQ6UWT2 76 aa9.67□□□□□ -0.86
COL5A3-202ENST00000461214 TEX43Q6ZNM6 134 aa9.67□□□□□ -0.86
COL5A3-202ENST00000461214 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
COL5A3-202ENST00000461214 UBE2WQ96B02 151 aa9.67□□□□□ -0.86
COL5A3-202ENST00000461214 PACRGQ96M98 296 aaPredicted RBP9.67□□□□□ -0.86
COL5A3-202ENST00000461214 NUPR1O60356 82 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 S100A6P06703 90 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 CLPSL2Q6UWE3 100 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 FAM19A2Q8N3H0 131 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 AMELXQ99217 191 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 C2orf88Q9BSF0 95 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 PKHD1P08F94 4074 aa9.66□□□□□ -0.86
COL5A3-202ENST00000461214 M0R2N4 97 aa9.65□□□□□ -0.86
COL5A3-202ENST00000461214 LEPROTL1O95214 131 aa9.65□□□□□ -0.86
COL5A3-202ENST00000461214 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.86
COL5A3-202ENST00000461214 C1orf43Q9BWL3 253 aa9.65□□□□□ -0.86
COL5A3-202ENST00000461214 VPS13DQ5THJ4 4388 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 RNASE13Q5GAN3 156 aaKnown RBP9.64□□□□□ -0.87
COL5A3-202ENST00000461214 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
COL5A3-202ENST00000461214 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 VCX2Q9H322 139 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 Q9HAA7 133 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
COL5A3-202ENST00000461214 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
COL5A3-202ENST00000461214 SS18Q15532 418 aa9.63□□□□□ -0.87
COL5A3-202ENST00000461214 BAALCQ8WXS3 180 aa9.63□□□□□ -0.87
COL5A3-202ENST00000461214 PMVKQ15126 192 aa9.62□□□□□ -0.87
COL5A3-202ENST00000461214 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
COL5A3-202ENST00000461214 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
COL5A3-202ENST00000461214 IGKV3OR2-268A0A0C4DH90 116 aa9.61□□□□□ -0.87
COL5A3-202ENST00000461214 SEC11AP67812 179 aa9.61□□□□□ -0.87
COL5A3-202ENST00000461214 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
COL5A3-202ENST00000461214 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
COL5A3-202ENST00000461214 TRAV12-1A0A0B4J245 112 aa9.6□□□□□ -0.87
COL5A3-202ENST00000461214 UBE2D1P51668 147 aa9.6□□□□□ -0.87
COL5A3-202ENST00000461214 MAPKAPK5-AS1Q8N8E1 139 aa9.6□□□□□ -0.87
COL5A3-202ENST00000461214 CHCHD10Q8WYQ3 142 aaPredicted RBP9.6□□□□□ -0.87
COL5A3-202ENST00000461214 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
COL5A3-202ENST00000461214 DYNC1H1Q14204 4646 aaKnown RBP9.59□□□□□ -0.87
COL5A3-202ENST00000461214 IGLV10-54A0A075B6I4 117 aa9.59□□□□□ -0.87
COL5A3-202ENST00000461214 PSCAO43653 123 aa9.59□□□□□ -0.87
COL5A3-202ENST00000461214 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
COL5A3-202ENST00000461214 CST9LQ9H4G1 147 aa9.59□□□□□ -0.87
COL5A3-202ENST00000461214 C5orf52A6NGY3 159 aa9.58□□□□□ -0.88
COL5A3-202ENST00000461214 PRSS1P07477 247 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms