RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 TRAV22A0A0B4J277 110 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 IGHV3-20A0A0C4DH32 117 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 BPY2O14599 106 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 FOLR3P41439 243 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 LINC01547P58512 204 aaPredicted RBP3.99□□□□□ -1.77
HMGB4-202ENST00000458277 SYCNQ0VAF6 134 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 FAM19A3Q7Z5A8 133 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
HMGB4-202ENST00000458277 ZNF625Q96I27 306 aaPredicted RBP3.99□□□□□ -1.77
HMGB4-202ENST00000458277 USF3Q68DE3 2245 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 CABIN1Q9Y6J0 2220 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 USP34Q70CQ2 3546 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 MUC6Q6W4X9 2439 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 IGHV3-64A0A075B6Q5 118 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 DNAJC9-AS1A6NH13 148 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 F5H697 171 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 K7EIM0 57 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 CTSGP08311 255 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 CCL3P10147 92 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 RPL39P62891 51 aaKnown RBP3.98□□□□□ -1.77
HMGB4-202ENST00000458277 Q9HAA7 133 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 MYO15AQ9UKN7 3530 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 GON4LQ3T8J9 2241 aa3.98□□□□□ -1.77
HMGB4-202ENST00000458277 IGHV1-3A0A0C4DH29 117 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 A8MUN3 132 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 LECT2O14960 151 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 IGHV3-9P01782 118 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 HAMPP81172 84 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 KIAA0087Q14695 138 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 DEFB114Q30KQ6 69 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 FAM229BQ4G0N7 80 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 C10orf55Q5SWW7 151 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 C9orf66Q5T8R8 295 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 FAM74A4Q5TZK3 123 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 SUMO4Q6EEV6 95 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 CLEC19AQ6UXS0 136 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 Q6YL49 198 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 Q6ZRP5 223 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
HMGB4-202ENST00000458277 ZNRF1Q8ND25 227 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 PRSS33Q8NF86 280 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 SPATA3Q8NHX4 192 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 LEAP2Q969E1 77 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 ABCA7Q8IZY2 2146 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 UNC13CQ8NB66 2214 aa3.97□□□□□ -1.77
HMGB4-202ENST00000458277 KNL1Q8NG31 2342 aa3.96□□□□□ -1.77
HMGB4-202ENST00000458277 DMDP11532 3685 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 A0A1B0GW54 56 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 NCR3O14931 201 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 GNLYP22749 145 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 RPL36AP83881 106 aaKnown RBP3.96□□□□□ -1.78
HMGB4-202ENST00000458277 PRR26Q8N8Z3 221 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 CCL17Q92583 94 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 RPL36ALQ969Q0 106 aaKnown RBP3.96□□□□□ -1.78
HMGB4-202ENST00000458277 Q9H8V8 135 aa3.96□□□□□ -1.78
HMGB4-202ENST00000458277 DMXL1Q9Y485 3027 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 TRAV10A0A0B4J240 114 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 A6NN06 94 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 SPRY3O43610 288 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 MP68P56378 58 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 LINC00315P59091 139 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 Q6ZSV7 163 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 Q75L30 129 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 DEFB119Q8N690 84 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 SMIM11BQ8TCY0 68 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 CACNA1EQ15878 2313 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 DSCAMO60469 2012 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 LAMA1P25391 3075 aa3.95□□□□□ -1.78
HMGB4-202ENST00000458277 NACAE9PAV3 2078 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 OTOGLQ3ZCN5 2332 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 IGLV11-55A0A075B6I3 123 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 A0A087WYN8 130 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 HCG22E2RYF7 251 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 M0QY20 66 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 GNRH2O43555 120 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 LY6HO94772 140 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 IGKV3-15P01624 115 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 MRGPRG-AS1Q2M3A8 158 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 Q6ZQT0 140 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
HMGB4-202ENST00000458277 CFAP54Q96N23 3096 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 SDK1Q7Z5N4 2213 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 IGHV3-21A0A0B4J1V1 117 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 IGKV2-29A2NJV5 120 aaPredicted RBP3.93□□□□□ -1.78
HMGB4-202ENST00000458277 PSPHP1O15172 72 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 PSCAO43653 123 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 LY6G6DO95868 133 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 PRM2P04554 102 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 NDPQ00604 133 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 SEM1Q6ZVN7 128 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 Q8N814 137 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms