RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 PKD1P98161 4303 aa9.33□□□□□ -0.92
TIMP1-205ENST00000456754 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
TIMP1-205ENST00000456754 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
TIMP1-205ENST00000456754 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
TIMP1-205ENST00000456754 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 ZNF25P17030 456 aaPredicted RBP9.32□□□□□ -0.92
TIMP1-205ENST00000456754 BTF3P20290 206 aaKnown RBP9.32□□□□□ -0.92
TIMP1-205ENST00000456754 S100A1P23297 94 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 PMCHL1Q16048 86 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 ZNF664Q8N3J9 261 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 TMEM101Q96IK0 257 aa9.32□□□□□ -0.92
TIMP1-205ENST00000456754 A0A087WTM6 91 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 PSCAO43653 123 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 Q0VG73 95 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 MIAQ16674 131 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 FA2HQ7L5A8 372 aa9.31□□□□□ -0.92
TIMP1-205ENST00000456754 HECTD4Q9Y4D8 3996 aa9.3□□□□□ -0.92
TIMP1-205ENST00000456754 A0A096LNJ9 63 aa9.3□□□□□ -0.92
TIMP1-205ENST00000456754 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
TIMP1-205ENST00000456754 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
TIMP1-205ENST00000456754 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
TIMP1-205ENST00000456754 C1orf43Q9BWL3 253 aa9.3□□□□□ -0.92
TIMP1-205ENST00000456754 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
TIMP1-205ENST00000456754 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
TIMP1-205ENST00000456754 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
TIMP1-205ENST00000456754 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
TIMP1-205ENST00000456754 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
TIMP1-205ENST00000456754 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
TIMP1-205ENST00000456754 LINC00959A0A1B0GUT2 108 aa9.28□□□□□ -0.92
TIMP1-205ENST00000456754 GAGE12HA6NDE8 117 aa9.28□□□□□ -0.92
TIMP1-205ENST00000456754 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
TIMP1-205ENST00000456754 LINC00614P0C842 121 aa9.28□□□□□ -0.92
TIMP1-205ENST00000456754 LINC00310P59036 64 aa9.28□□□□□ -0.92
TIMP1-205ENST00000456754 CHCHD10Q8WYQ3 142 aaPredicted RBP9.28□□□□□ -0.92
TIMP1-205ENST00000456754 RMI2Q96E14 147 aa9.28□□□□□ -0.92
TIMP1-205ENST00000456754 TRAV13-1A0A0B4J241 112 aa9.27□□□□□ -0.93
TIMP1-205ENST00000456754 K7EMI3 77 aa9.27□□□□□ -0.93
TIMP1-205ENST00000456754 XCL1P47992 114 aa9.27□□□□□ -0.93
TIMP1-205ENST00000456754 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
TIMP1-205ENST00000456754 TOMM6Q96B49 74 aa9.27□□□□□ -0.93
TIMP1-205ENST00000456754 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
TIMP1-205ENST00000456754 CCL25O15444 150 aa9.26□□□□□ -0.93
TIMP1-205ENST00000456754 NUPR1O60356 82 aa9.26□□□□□ -0.93
TIMP1-205ENST00000456754 MRPS36P82909 103 aaKnown RBP9.26□□□□□ -0.93
TIMP1-205ENST00000456754 SPATA12Q7Z6I5 190 aa9.26□□□□□ -0.93
TIMP1-205ENST00000456754 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
TIMP1-205ENST00000456754 PYGO1Q9Y3Y4 419 aa9.26□□□□□ -0.93
TIMP1-205ENST00000456754 FOXI1Q12951 378 aa9.25□□□□□ -0.93
TIMP1-205ENST00000456754 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
TIMP1-205ENST00000456754 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
TIMP1-205ENST00000456754 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
TIMP1-205ENST00000456754 BAGE3Q86Y29 109 aa9.24□□□□□ -0.93
TIMP1-205ENST00000456754 TMEM141Q96I45 108 aa9.24□□□□□ -0.93
TIMP1-205ENST00000456754 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
TIMP1-205ENST00000456754 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-205ENST00000456754 IFITM10A6NMD0 228 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 SERF1AO75920 110 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 SMAGPQ0VAQ4 97 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-205ENST00000456754 FAM19A2Q8N3H0 131 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 Q8N814 137 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 COX11Q9Y6N1 276 aa9.23□□□□□ -0.93
TIMP1-205ENST00000456754 DYNC1H1Q14204 4646 aaKnown RBP9.22□□□□□ -0.93
TIMP1-205ENST00000456754 COX6A2Q02221 97 aa9.22□□□□□ -0.93
TIMP1-205ENST00000456754 SS18Q15532 418 aa9.22□□□□□ -0.93
TIMP1-205ENST00000456754 PDZD11Q5EBL8 140 aa9.22□□□□□ -0.93
TIMP1-205ENST00000456754 ERASQ7Z444 233 aa9.22□□□□□ -0.93
TIMP1-205ENST00000456754 AMELXQ99217 191 aa9.22□□□□□ -0.93
TIMP1-205ENST00000456754 HBDP02042 147 aa9.21□□□□□ -0.94
TIMP1-205ENST00000456754 PRSS1P07477 247 aa9.21□□□□□ -0.94
TIMP1-205ENST00000456754 RAB5BP61020 215 aa9.21□□□□□ -0.94
TIMP1-205ENST00000456754 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
TIMP1-205ENST00000456754 NTN5Q8WTR8 489 aaPredicted RBP9.21□□□□□ -0.94
TIMP1-205ENST00000456754 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.94
TIMP1-205ENST00000456754 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
TIMP1-205ENST00000456754 UBE2D1P51668 147 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 LINC01620Q4KN68 170 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 LINC00242Q5T6M2 205 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 TEX43Q6ZNM6 134 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 C5orf38Q86SI9 138 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 VCX2Q9H322 139 aa9.2□□□□□ -0.94
TIMP1-205ENST00000456754 C1orf196B1AJZ1 125 aa9.19□□□□□ -0.94
TIMP1-205ENST00000456754 CD164L2Q6UWJ8 174 aa9.19□□□□□ -0.94
TIMP1-205ENST00000456754 LINC00526Q96FQ7 95 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms