RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SYNJ2BPP57105 145 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 CFHR3Q02985 330 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 PIK3CD-AS1Q5SR53 167 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 C2orf48Q96LS8 159 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 PEMTQ9UBM1 199 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 IGF2RP11717 2491 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 K7ENP7 123 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 TRACP01848 142 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 COX7CP15954 63 aa7.44□□□□□ -1.22
CLIP4-208ENST00000456385 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
CLIP4-208ENST00000456385 C9orf129Q5T035 196 aaKnown RBP7.43□□□□□ -1.22
CLIP4-208ENST00000456385 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
CLIP4-208ENST00000456385 DGAT2L7PQ6IED9 249 aa7.43□□□□□ -1.22
CLIP4-208ENST00000456385 FAM19A5Q7Z5A7 132 aaPredicted RBP7.43□□□□□ -1.22
CLIP4-208ENST00000456385 TRAV13-1A0A0B4J241 112 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 hADV29S1A0JD25 119 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 PSMB8P28062 276 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 CXCL5P42830 114 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 ATP5J2P56134 94 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 CSPG4Q6UVK1 2322 aa7.42□□□□□ -1.22
CLIP4-208ENST00000456385 IGHV4-61A0A0C4DH41 118 aa7.41□□□□□ -1.22
CLIP4-208ENST00000456385 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
CLIP4-208ENST00000456385 ATP5G1P05496 136 aa7.41□□□□□ -1.22
CLIP4-208ENST00000456385 PIMREGQ9BSJ6 248 aa7.41□□□□□ -1.22
CLIP4-208ENST00000456385 HIVEP3Q5T1R4 2406 aa7.41□□□□□ -1.22
CLIP4-208ENST00000456385 J3KT08 172 aa7.4□□□□□ -1.22
CLIP4-208ENST00000456385 MALP21145 153 aa7.4□□□□□ -1.22
CLIP4-208ENST00000456385 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
CLIP4-208ENST00000456385 KLRB1Q12918 225 aa7.4□□□□□ -1.22
CLIP4-208ENST00000456385 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.23
CLIP4-208ENST00000456385 RBMY1BA6NDE4 496 aaKnown RBP7.4□□□□□ -1.23
CLIP4-208ENST00000456385 RBMY1EA6NEQ0 496 aaKnown RBP7.4□□□□□ -1.23
CLIP4-208ENST00000456385 RBMY1DP0C7P1 496 aaKnown RBP7.4□□□□□ -1.23
CLIP4-208ENST00000456385 CRYGAP11844 174 aa7.4□□□□□ -1.23
CLIP4-208ENST00000456385 SPG11Q96JI7 2443 aa7.4□□□□□ -1.23
CLIP4-208ENST00000456385 C2CD3Q4AC94 2353 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 DEFB131AP59861 70 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 FAM222AQ5U5X8 452 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 HIST2H2BCQ6DN03 193 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 HIST2H2BDQ6DRA6 164 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 C14orf132Q9NPU4 83 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 A0A087WVE0 104 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 A0A087WYN8 130 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 IGHV3-53P01767 116 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 LRRC75A-AS1Q8N1F1 130 aa7.39□□□□□ -1.23
CLIP4-208ENST00000456385 SMIM9A6NGZ8 99 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 LINC00337Q8N6G1 96 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 RNF152Q8N8N0 203 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 KIR2DL5BQ8NHK3 375 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 A0A1B0GX51 115 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 ATOX1O00244 68 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 AVPP01185 164 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 Q96MF0 132 aa7.38□□□□□ -1.23
CLIP4-208ENST00000456385 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
CLIP4-208ENST00000456385 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
CLIP4-208ENST00000456385 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
CLIP4-208ENST00000456385 F5H768 121 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 DNAL4O96015 105 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
CLIP4-208ENST00000456385 ZNF415Q09FC8 603 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 C11orf72Q8NBR9 251 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 PRORYQ9H606 182 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 ZANQ9Y493 2812 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 RPL28P46779 137 aaKnown RBP7.36□□□□□ -1.23
CLIP4-208ENST00000456385 C5orf47Q569G3 176 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 MUC6Q6W4X9 2439 aa7.36□□□□□ -1.23
CLIP4-208ENST00000456385 IGHV4-59P01825 116 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 NBPF19A0A087WUL8 3843 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 C19orf84I3L1E1 186 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 CRPP02741 224 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 NTM-AS1Q6ZSK4 140 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 SMIM11BQ8TCY0 68 aa7.35□□□□□ -1.23
CLIP4-208ENST00000456385 LINC01561Q8N1V8 128 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 MXRA5Q9NR99 2828 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 TRAV13-2A0A0B4J235 113 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 NCR3O14931 201 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 OXTP01178 125 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 DEFB136Q30KP8 78 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
CLIP4-208ENST00000456385 TMEM89A2RUT3 159 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 SLPIP03973 132 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
CLIP4-208ENST00000456385 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 DPH3Q96FX2 82 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 DSCR8Q96T75 97 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 CDC42SE2Q9NRR3 84 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 C18orf65Q6ZTR6 163 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 UPK3BQ9BT76 320 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 TOMM7Q9P0U1 55 aa7.33□□□□□ -1.24
CLIP4-208ENST00000456385 IGHV4-30-2A0A087WSY4 118 aa7.32□□□□□ -1.24
CLIP4-208ENST00000456385 SLURP1P55000 103 aa7.32□□□□□ -1.24
CLIP4-208ENST00000456385 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
CLIP4-208ENST00000456385 LECT2O14960 151 aa7.32□□□□□ -1.24
CLIP4-208ENST00000456385 PF4P02776 101 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms