RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 A0A087WX48 190 aa8.6□□□□□ -1.03
HLA-DPA1-244ENST00000453337 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
HLA-DPA1-244ENST00000453337 TRAV12-1A0A0B4J245 112 aa8.59□□□□□ -1.03
HLA-DPA1-244ENST00000453337 PMVKQ15126 192 aa8.59□□□□□ -1.03
HLA-DPA1-244ENST00000453337 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
HLA-DPA1-244ENST00000453337 OPRPNQ99935 248 aaPredicted RBP8.59□□□□□ -1.03
HLA-DPA1-244ENST00000453337 CDC42SE2Q9NRR3 84 aa8.59□□□□□ -1.03
HLA-DPA1-244ENST00000453337 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
HLA-DPA1-244ENST00000453337 TGP01266 2768 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 C20orf202A1L168 122 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 H0Y8G0 127 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 RBX1P62877 108 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 ZFAND6Q6FIF0 208 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 TEX43Q6ZNM6 134 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 AMELXQ99217 191 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
HLA-DPA1-244ENST00000453337 PRSS29PA6NIE9 313 aa8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 JOSD1Q15040 202 aaPredicted RBP8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 Q6ZUT4 128 aa8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
HLA-DPA1-244ENST00000453337 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
HLA-DPA1-244ENST00000453337 LINC01545Q5VT33 79 aa8.56□□□□□ -1.04
HLA-DPA1-244ENST00000453337 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
HLA-DPA1-244ENST00000453337 UBE2DNLQ8IWF7 75 aa8.56□□□□□ -1.04
HLA-DPA1-244ENST00000453337 Q8N976 141 aa8.56□□□□□ -1.04
HLA-DPA1-244ENST00000453337 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
HLA-DPA1-244ENST00000453337 C3orf84H3BNL1 204 aa8.55□□□□□ -1.04
HLA-DPA1-244ENST00000453337 SIVA1O15304 175 aa8.55□□□□□ -1.04
HLA-DPA1-244ENST00000453337 ANGP03950 147 aaKnown RBP8.55□□□□□ -1.04
HLA-DPA1-244ENST00000453337 ODF1Q14990 250 aa8.55□□□□□ -1.04
HLA-DPA1-244ENST00000453337 LINC01556Q5JQF7 62 aa8.55□□□□□ -1.04
HLA-DPA1-244ENST00000453337 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
HLA-DPA1-244ENST00000453337 F8VRH5 84 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 CCL25O15444 150 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 IGHV3-33P01772 117 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 SEC11AP67812 179 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 RNASE13Q5GAN3 156 aaKnown RBP8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
HLA-DPA1-244ENST00000453337 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
HLA-DPA1-244ENST00000453337 DPM2O94777 84 aa8.53□□□□□ -1.04
HLA-DPA1-244ENST00000453337 Q9H8V8 135 aa8.53□□□□□ -1.04
HLA-DPA1-244ENST00000453337 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
HLA-DPA1-244ENST00000453337 KLK12Q9UKR0 248 aa8.53□□□□□ -1.04
HLA-DPA1-244ENST00000453337 K7EP13 123 aa8.52□□□□□ -1.05
HLA-DPA1-244ENST00000453337 PLNP26678 52 aa8.52□□□□□ -1.05
HLA-DPA1-244ENST00000453337 UBE2D1P51668 147 aa8.52□□□□□ -1.05
HLA-DPA1-244ENST00000453337 SS18Q15532 418 aa8.52□□□□□ -1.05
HLA-DPA1-244ENST00000453337 PYY3Q5JQD4 70 aa8.52□□□□□ -1.05
HLA-DPA1-244ENST00000453337 LINC00269Q8N2A0 174 aa8.52□□□□□ -1.05
HLA-DPA1-244ENST00000453337 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
HLA-DPA1-244ENST00000453337 IGKCP01834 107 aa8.51□□□□□ -1.05
HLA-DPA1-244ENST00000453337 REG3AQ06141 175 aa8.51□□□□□ -1.05
HLA-DPA1-244ENST00000453337 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
HLA-DPA1-244ENST00000453337 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 A0A0J9YXV3 536 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 IGLC3P0DOY3 106 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 NFE4Q86UQ8 179 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 Q8N3U1 123 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 C10orf126Q8N4M7 172 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 GEMIN7Q9H840 131 aaKnown RBP8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 PRR34Q9NV39 138 aa8.5□□□□□ -1.05
HLA-DPA1-244ENST00000453337 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
HLA-DPA1-244ENST00000453337 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
HLA-DPA1-244ENST00000453337 CRPP02741 224 aa8.49□□□□□ -1.05
HLA-DPA1-244ENST00000453337 SMIM6P0DI80 62 aa8.49□□□□□ -1.05
HLA-DPA1-244ENST00000453337 HERVK_113P63121 156 aa8.49□□□□□ -1.05
HLA-DPA1-244ENST00000453337 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
HLA-DPA1-244ENST00000453337 TENM2Q9NT68 2774 aa8.48□□□□□ -1.05
HLA-DPA1-244ENST00000453337 HSBP1L1C9JCN9 74 aa8.48□□□□□ -1.05
HLA-DPA1-244ENST00000453337 MIAQ16674 131 aa8.48□□□□□ -1.05
HLA-DPA1-244ENST00000453337 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
HLA-DPA1-244ENST00000453337 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
HLA-DPA1-244ENST00000453337 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 S100A12P80511 92 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 CLPSL2Q6UWE3 100 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 CHAC1Q9BUX1 264 aa8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 DYNC2H1Q8NCM8 4307 aaKnown RBP8.47□□□□□ -1.05
HLA-DPA1-244ENST00000453337 COX6A2Q02221 97 aa8.46□□□□□ -1.06
HLA-DPA1-244ENST00000453337 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
HLA-DPA1-244ENST00000453337 DNAH7Q8WXX0 4024 aa8.45□□□□□ -1.06
HLA-DPA1-244ENST00000453337 H3BRM9 83 aa8.45□□□□□ -1.06
HLA-DPA1-244ENST00000453337 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
HLA-DPA1-244ENST00000453337 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
HLA-DPA1-244ENST00000453337 CHCHD10Q8WYQ3 142 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms