RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KLK9Q9UKQ9 250 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 KNTC1P50748 2209 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 ANKRD17O75179 2603 aaKnown RBP1.62□□□□□ -2.15
USP53-202ENST00000450251 TRBV6-8A0A0A6YYG3 113 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 DEFB112Q30KQ8 113 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 SCXQ7RTU7 201 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 Q8IZM0 81 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 CEP192Q8TEP8 1941 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 EPOPA6NHQ4 379 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 LY6LH3BQJ8 138 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 H7BZZ5 65 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 PSPHP1O15172 72 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 SPINK13Q1W4C9 94 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 SMCR5Q8TEV8 140 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 C10orf142B7Z368 130 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 CDKN2A-AS1Q9UH64 79 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 PTPRSQ13332 1948 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 IGHV3OR16-8A0A075B7F1 116 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 A0A087WYN8 130 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 PRAC2D3DTV9 90 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 HILS1P60008 231 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 RNASE13Q5GAN3 156 aaKnown RBP1.62□□□□□ -2.15
USP53-202ENST00000450251 USP9YO00507 2555 aaPredicted RBP1.62□□□□□ -2.15
USP53-202ENST00000450251 USP34Q70CQ2 3546 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 TCF20Q9UGU0 1960 aaKnown RBP1.62□□□□□ -2.15
USP53-202ENST00000450251 IGLV5-45A0A087WSX0 123 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 LOC100131303A0A0U1RQF7 123 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 ZNF503-AS2A6NEH8 195 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-53P01767 116 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 GPHB5Q86YW7 130 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 Q8N9L7 120 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 BPESC1Q9GZL8 116 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 APC2O95996 2303 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 DOCK8Q8NF50 2099 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGLV5-39A0A0G2JS06 123 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 KLLNB2CW77 178 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 CDC42SE1Q9NRR8 79 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 SPTBN1Q01082 2364 aaKnown RBP1.61□□□□□ -2.15
USP53-202ENST00000450251 DOCK9Q9BZ29 2069 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGF2RP11717 2491 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-38A0A0C4DH36 116 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 OVOL3O00110 214 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 NANOS2P60321 138 aaKnown RBP1.61□□□□□ -2.15
USP53-202ENST00000450251 C6orf223Q8N319 242 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 PTPRQQ9UMZ3 2332 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 CREBBPQ92793 2442 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 E7EQL1 145 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 M0R378 163 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 LINC01565O15544 149 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGLV1-47P01700 117 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-11P01762 117 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 Q6ZQT0 140 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 FAM19A1Q7Z5A9 133 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 SPANXA2-OT1Q8N9U9 137 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 RPP25Q9BUL9 199 aaKnown RBP1.61□□□□□ -2.15
USP53-202ENST00000450251 POLEQ07864 2286 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 IGHV7-81A0A0B4J1V7 117 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 SMIM1B2RUZ4 78 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 H3BUX3 64 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 MYO9BQ13459 2157 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 C6orf99Q4VX62 202 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 SPAG11AQ6PDA7 123 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 LYPD2Q6UXB3 125 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 TP53AIP1Q9HCN2 124 aa1.61□□□□□ -2.15
USP53-202ENST00000450251 GCN1Q92616 2671 aaKnown RBP1.6□□□□□ -2.15
USP53-202ENST00000450251 SLPIP03973 132 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 RNASE3P12724 160 aaKnown RBP1.6□□□□□ -2.15
USP53-202ENST00000450251 DEFB131AP59861 70 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 C10orf25Q5T742 122 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 SMAD5-AS1Q9Y6J3 95 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 TRANK1O15050 2925 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LY6EQ16553 131 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 IL17DQ8TAD2 202 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 RBM12B-AS1Q9P1G2 102 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 Q9UF83 564 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 ODF3BA8MYP8 253 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 PRB4P10163 310 aaPredicted RBP1.6□□□□□ -2.15
USP53-202ENST00000450251 CCL18P55774 89 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 ADAMTSL4-AS1Q5T5F5 129 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 OBSCN-AS1Q96MR7 158 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 KIAA1549Q9HCM3 1950 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LRP4O75096 1905 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 H0Y9P7 68 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 DAZAP2Q15038 168 aaPredicted RBP1.6□□□□□ -2.15
USP53-202ENST00000450251 C9orf116Q5BN46 136 aaPredicted RBP1.6□□□□□ -2.15
USP53-202ENST00000450251 C9orf66Q5T8R8 295 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 C11orf72Q8NBR9 251 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 Q96MF0 132 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LINC00167Q96N53 147 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 Q9BRP9 147 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LY6G6DO95868 133 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 LINC00528Q8N1L1 170 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 TM2D3Q9BRN9 247 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 ZNRD1Q9P1U0 126 aa1.6□□□□□ -2.15
USP53-202ENST00000450251 CACNA1CQ13936 2221 aa1.59□□□□□ -2.15
USP53-202ENST00000450251 SPTBN2O15020 2390 aa1.59□□□□□ -2.15
USP53-202ENST00000450251 ZNF469Q96JG9 3925 aaPredicted RBP1.59□□□□□ -2.15
USP53-202ENST00000450251 EML6Q6ZMW3 1958 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms