RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
ITGB4-202ENST00000449880 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
ITGB4-202ENST00000449880 DNAJC9-AS1A6NH13 148 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 LYRM9A8MSI8 78 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
ITGB4-202ENST00000449880 UNQ9165/PRO28630Q6UXU0 137 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 DEFB4AO15263 64 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 MPLKIPQ8TAP9 179 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 TNCP24821 2201 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 EBI3Q14213 229 aa10.4□□□□□ -0.74
ITGB4-202ENST00000449880 C1orf195Q5TG92 126 aa10.39□□□□□ -0.75
ITGB4-202ENST00000449880 C11orf45Q8TAV5 145 aa10.38□□□□□ -0.75
ITGB4-202ENST00000449880 IGF1P05019 195 aa10.38□□□□□ -0.75
ITGB4-202ENST00000449880 POLR2KP53803 58 aaKnown RBP10.38□□□□□ -0.75
ITGB4-202ENST00000449880 LY6LH3BQJ8 138 aa10.37□□□□□ -0.75
ITGB4-202ENST00000449880 MAP6D1Q9H9H5 199 aa10.37□□□□□ -0.75
ITGB4-202ENST00000449880 TSHBP01222 138 aa10.37□□□□□ -0.75
ITGB4-202ENST00000449880 C19orf84I3L1E1 186 aa10.37□□□□□ -0.75
ITGB4-202ENST00000449880 B9D2Q9BPU9 175 aa10.37□□□□□ -0.75
ITGB4-202ENST00000449880 COL4A2P08572 1712 aa10.36□□□□□ -0.75
ITGB4-202ENST00000449880 K7EQG2 157 aa10.36□□□□□ -0.75
ITGB4-202ENST00000449880 LMO4P61968 165 aa10.36□□□□□ -0.75
ITGB4-202ENST00000449880 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
ITGB4-202ENST00000449880 TRAV7A0A075B6U4 112 aa10.35□□□□□ -0.75
ITGB4-202ENST00000449880 COX8CQ7Z4L0 72 aa10.35□□□□□ -0.75
ITGB4-202ENST00000449880 DEFB1P60022 68 aa10.35□□□□□ -0.75
ITGB4-202ENST00000449880 Q6ZS46 218 aa10.35□□□□□ -0.75
ITGB4-202ENST00000449880 A0A0U1RQV1 116 aa10.34□□□□□ -0.75
ITGB4-202ENST00000449880 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
ITGB4-202ENST00000449880 SPG11Q96JI7 2443 aa10.33□□□□□ -0.76
ITGB4-202ENST00000449880 CPAMD8Q8IZJ3 1885 aa10.33□□□□□ -0.76
ITGB4-202ENST00000449880 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
ITGB4-202ENST00000449880 C11orf71Q6IPW1 123 aa10.33□□□□□ -0.76
ITGB4-202ENST00000449880 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
ITGB4-202ENST00000449880 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
ITGB4-202ENST00000449880 CCKP06307 115 aa10.32□□□□□ -0.76
ITGB4-202ENST00000449880 HILS1P60008 231 aa10.32□□□□□ -0.76
ITGB4-202ENST00000449880 RNASE3P12724 160 aaKnown RBP10.32□□□□□ -0.76
ITGB4-202ENST00000449880 Q6YL49 198 aa10.32□□□□□ -0.76
ITGB4-202ENST00000449880 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
ITGB4-202ENST00000449880 PSMG3-AS1Q96PY0 264 aa10.31□□□□□ -0.76
ITGB4-202ENST00000449880 UBE2D4Q9Y2X8 147 aa10.31□□□□□ -0.76
ITGB4-202ENST00000449880 SLPIP03973 132 aa10.31□□□□□ -0.76
ITGB4-202ENST00000449880 ATG2AQ2TAZ0 1938 aa10.3□□□□□ -0.76
ITGB4-202ENST00000449880 SONP18583 2426 aaKnown RBP10.3□□□□□ -0.76
ITGB4-202ENST00000449880 KLLNB2CW77 178 aa10.3□□□□□ -0.76
ITGB4-202ENST00000449880 IGHV4-31P0DP07 118 aa10.3□□□□□ -0.76
ITGB4-202ENST00000449880 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
ITGB4-202ENST00000449880 TRBV7-7A0A0K0K1E9 115 aa10.3□□□□□ -0.76
ITGB4-202ENST00000449880 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
ITGB4-202ENST00000449880 KIR2DL5BQ8NHK3 375 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 UTRNP46939 3433 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 ARHGAP21Q5T5U3 1957 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 TRBV6-4A0A1B0GX49 114 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 H0Y9J4 135 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
ITGB4-202ENST00000449880 COX17Q14061 63 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 WFDC11Q8NEX6 87 aa10.29□□□□□ -0.76
ITGB4-202ENST00000449880 REG3AQ06141 175 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 HRCT1Q6UXD1 115 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
ITGB4-202ENST00000449880 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 SMIM11BQ8TCY0 68 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 LINC01548A6NM66 108 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 MIFP14174 115 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 FAM19A5Q7Z5A7 132 aaPredicted RBP10.28□□□□□ -0.76
ITGB4-202ENST00000449880 EXPH5Q8NEV8 1989 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 Q6ZTI0 123 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
ITGB4-202ENST00000449880 CUL9Q8IWT3 2517 aa10.27□□□□□ -0.76
ITGB4-202ENST00000449880 DEFB114Q30KQ6 69 aa10.27□□□□□ -0.76
ITGB4-202ENST00000449880 SEC61GP60059 68 aa10.27□□□□□ -0.77
ITGB4-202ENST00000449880 ANKHD1Q8IWZ3 2542 aaKnown RBP10.27□□□□□ -0.77
ITGB4-202ENST00000449880 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
ITGB4-202ENST00000449880 RPL28P46779 137 aaKnown RBP10.27□□□□□ -0.77
ITGB4-202ENST00000449880 PRR15LQ9BU68 103 aa10.27□□□□□ -0.77
ITGB4-202ENST00000449880 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
ITGB4-202ENST00000449880 LINC00269Q8N2A0 174 aa10.27□□□□□ -0.77
ITGB4-202ENST00000449880 CHCHD10Q8WYQ3 142 aaPredicted RBP10.27□□□□□ -0.77
ITGB4-202ENST00000449880 SNURFQ9Y675 71 aa10.27□□□□□ -0.77
ITGB4-202ENST00000449880 A0A096LNJ9 63 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 Q8N6K4 173 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 C6orf99Q4VX62 202 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 CRYGDP07320 174 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 LINC01546A6NGU7 62 aa10.26□□□□□ -0.77
ITGB4-202ENST00000449880 MRGPRG-AS1Q2M3A8 158 aa10.25□□□□□ -0.77
ITGB4-202ENST00000449880 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
ITGB4-202ENST00000449880 INAFM1C9JVW0 142 aa10.25□□□□□ -0.77
ITGB4-202ENST00000449880 SCXQ7RTU7 201 aa10.24□□□□□ -0.77
ITGB4-202ENST00000449880 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
ITGB4-202ENST00000449880 PRR9Q5T870 116 aa10.24□□□□□ -0.77
ITGB4-202ENST00000449880 PRR14LQ5THK1 2151 aa10.23□□□□□ -0.77
ITGB4-202ENST00000449880 EML5Q05BV3 1969 aa10.22□□□□□ -0.77
ITGB4-202ENST00000449880 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
ITGB4-202ENST00000449880 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms