RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PYGO1Q9Y3Y4 419 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 RNF185Q96GF1 192 aa7.52□□□□□ -1.2
SCN10A-201ENST00000449082 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 BPY2O14599 106 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 PRR14LQ5THK1 2151 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 U3KQK5 164 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 TRBV27A0A0K0K1C4 114 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 CD164L2Q6UWJ8 174 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 A0A096LNI7 61 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 KLLNB2CW77 178 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 XAGE1AQ9HD64 81 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 M0R2N4 97 aa7.52□□□□□ -1.21
SCN10A-201ENST00000449082 LY6G6CO95867 125 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 AVPP01185 164 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 DCANP1Q8TF63 244 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
SCN10A-201ENST00000449082 TCL1BO95988 128 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 CLUHP3Q96NS8 147 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 SMR3AQ99954 134 aa7.51□□□□□ -1.21
SCN10A-201ENST00000449082 LRP4O75096 1905 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 IGKV4-1P06312 121 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 KRTAP10-9P60411 292 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 IGHV4-30-4P0DP06 118 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 IGLV4-69A0A075B6H9 119 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 A0A0J9YWU9 116 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 PRB2P02812 416 aaPredicted RBP7.5□□□□□ -1.21
SCN10A-201ENST00000449082 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
SCN10A-201ENST00000449082 TSHBP01222 138 aa7.49□□□□□ -1.21
SCN10A-201ENST00000449082 SONP18583 2426 aaKnown RBP7.49□□□□□ -1.21
SCN10A-201ENST00000449082 SEC61GP60059 68 aa7.49□□□□□ -1.21
SCN10A-201ENST00000449082 UPK3BQ9BT76 320 aa7.49□□□□□ -1.21
SCN10A-201ENST00000449082 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
SCN10A-201ENST00000449082 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
SCN10A-201ENST00000449082 LOC100131303A0A0U1RQF7 123 aa7.49□□□□□ -1.21
SCN10A-201ENST00000449082 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
SCN10A-201ENST00000449082 PRR9Q5T870 116 aa7.49□□□□□ -1.21
SCN10A-201ENST00000449082 UBE2D1P51668 147 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 MRGPRG-AS1Q2M3A8 158 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 LINC00959A0A1B0GUT2 108 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 B5MCH6 92 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 LINC00643Q86TS7 51 aa7.48□□□□□ -1.21
SCN10A-201ENST00000449082 WNK1Q9H4A3 2382 aa7.47□□□□□ -1.21
SCN10A-201ENST00000449082 MRPS36P82909 103 aaKnown RBP7.47□□□□□ -1.21
SCN10A-201ENST00000449082 M0R378 163 aa7.47□□□□□ -1.21
SCN10A-201ENST00000449082 UBE2D4Q9Y2X8 147 aa7.47□□□□□ -1.21
SCN10A-201ENST00000449082 NRACQ8N912 160 aa7.47□□□□□ -1.21
SCN10A-201ENST00000449082 PTH2Q96A98 100 aa7.47□□□□□ -1.21
SCN10A-201ENST00000449082 DSCAML1Q8TD84 2053 aa7.46□□□□□ -1.21
SCN10A-201ENST00000449082 NUPR2A6NF83 97 aa7.46□□□□□ -1.21
SCN10A-201ENST00000449082 CACNA1AO00555 2505 aa7.46□□□□□ -1.21
SCN10A-201ENST00000449082 C11orf21Q9P2W6 132 aa7.46□□□□□ -1.21
SCN10A-201ENST00000449082 LINC00474Q9P2X8 69 aa7.46□□□□□ -1.21
SCN10A-201ENST00000449082 TIMM17BO60830 172 aa7.46□□□□□ -1.22
SCN10A-201ENST00000449082 C6orf99Q4VX62 202 aa7.46□□□□□ -1.22
SCN10A-201ENST00000449082 DHRS4-AS1Q9P1J3 65 aa7.46□□□□□ -1.22
SCN10A-201ENST00000449082 SLPIP03973 132 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 C16orf95Q9H693 158 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 NAV3Q8IVL0 2385 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 TANC2Q9HCD6 1990 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 SORL1Q92673 2214 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 CRIP2P52943 208 aaPredicted RBP7.45□□□□□ -1.22
SCN10A-201ENST00000449082 PRM2P04554 102 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 UBE2D3P61077 147 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 UBE2D2P62837 147 aa7.45□□□□□ -1.22
SCN10A-201ENST00000449082 ATRXP46100 2492 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 HIVEP3Q5T1R4 2406 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 COL5A1P20908 1838 aaPredicted RBP7.44□□□□□ -1.22
SCN10A-201ENST00000449082 PTPRSQ13332 1948 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
SCN10A-201ENST00000449082 COX17Q14061 63 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 ODF3L2Q3SX64 289 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 MAPKAPK5-AS1Q8N8E1 139 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 TRBV30A0A0K0K1B3 111 aa7.44□□□□□ -1.22
SCN10A-201ENST00000449082 SS18L2Q9UHA2 77 aa7.43□□□□□ -1.22
SCN10A-201ENST00000449082 MUC7Q8TAX7 377 aa7.43□□□□□ -1.22
SCN10A-201ENST00000449082 PRRC2AP48634 2157 aaKnown RBP7.43□□□□□ -1.22
SCN10A-201ENST00000449082 HCFC1P51610 2035 aa7.43□□□□□ -1.22
SCN10A-201ENST00000449082 TRIAP1O43715 76 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 G3V4G9 280 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 A8MZ25 164 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 ATP5EP2Q5VTU8 51 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 NAV2Q8IVL1 2488 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 C1orf158Q8N1D5 194 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 PPDPFQ9H3Y8 114 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 CCKP06307 115 aa7.42□□□□□ -1.22
SCN10A-201ENST00000449082 USP17L23D6RBM5 183 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 Q8IZM0 81 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 CDC42SE2Q9NRR3 84 aa7.41□□□□□ -1.22
SCN10A-201ENST00000449082 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms