RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
CDKN1A-204ENST00000448526 A8MZ25 164 aa12.17□□□□□ -0.46
CDKN1A-204ENST00000448526 GAGE4Q13068 117 aa12.17□□□□□ -0.46
CDKN1A-204ENST00000448526 GAGE5Q13069 117 aa12.17□□□□□ -0.46
CDKN1A-204ENST00000448526 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
CDKN1A-204ENST00000448526 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
CDKN1A-204ENST00000448526 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 CFC1P0CG37 223 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 UBE2D3P61077 147 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 UBE2D2P62837 147 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 SPATA3Q8NHX4 192 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 VWFP04275 2813 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 H3BMG7 143 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 TSPAN13O95857 204 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 PF4P02776 101 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 SPINK8P0C7L1 97 aa12.16□□□□□ -0.46
CDKN1A-204ENST00000448526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.15□□□□□ -0.46
CDKN1A-204ENST00000448526 C1QTNF4Q9BXJ3 329 aa12.15□□□□□ -0.46
CDKN1A-204ENST00000448526 INAFM1C9JVW0 142 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 OVOL2Q9BRP0 275 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
CDKN1A-204ENST00000448526 COX6A2Q02221 97 aa12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 SFTA2Q6UW10 78 aa12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 LITAFQ99732 161 aa12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 GEMIN7Q9H840 131 aaKnown RBP12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
CDKN1A-204ENST00000448526 A4D1N5 150 aa12.12□□□□□ -0.47
CDKN1A-204ENST00000448526 K7ERU9 68 aa12.11□□□□□ -0.47
CDKN1A-204ENST00000448526 WFDC2Q14508 124 aa12.11□□□□□ -0.47
CDKN1A-204ENST00000448526 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
CDKN1A-204ENST00000448526 TIRAPP58753 221 aa12.11□□□□□ -0.47
CDKN1A-204ENST00000448526 MTURNQ8N3F0 131 aa12.11□□□□□ -0.47
CDKN1A-204ENST00000448526 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
CDKN1A-204ENST00000448526 TMEM238C9JI98 176 aa12.1□□□□□ -0.47
CDKN1A-204ENST00000448526 LINC00242Q5T6M2 205 aa12.1□□□□□ -0.47
CDKN1A-204ENST00000448526 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
CDKN1A-204ENST00000448526 PRO0461Q9UI25 63 aa12.09□□□□□ -0.47
CDKN1A-204ENST00000448526 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
CDKN1A-204ENST00000448526 LOC107984156A0A0G2JMH3 177 aa12.08□□□□□ -0.47
CDKN1A-204ENST00000448526 TRBV6-4A0A1B0GX49 114 aa12.08□□□□□ -0.47
CDKN1A-204ENST00000448526 ARL17AQ8IVW1 177 aa12.08□□□□□ -0.47
CDKN1A-204ENST00000448526 TMEM101Q96IK0 257 aa12.08□□□□□ -0.47
CDKN1A-204ENST00000448526 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.47
CDKN1A-204ENST00000448526 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
CDKN1A-204ENST00000448526 F8W1H4 67 aa12.08□□□□□ -0.48
CDKN1A-204ENST00000448526 G3V4G9 280 aa12.08□□□□□ -0.48
CDKN1A-204ENST00000448526 FHL2Q14192 279 aa12.08□□□□□ -0.48
CDKN1A-204ENST00000448526 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.48
CDKN1A-204ENST00000448526 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 CDC42SE2Q9NRR3 84 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 TEX48A0A1B0GUV7 120 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 CRLF1O75462 422 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 VPS25Q9BRG1 176 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 GTSF1LQ9H1H1 148 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 HIVEP1P15822 2718 aa12.07□□□□□ -0.48
CDKN1A-204ENST00000448526 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
CDKN1A-204ENST00000448526 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
CDKN1A-204ENST00000448526 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
CDKN1A-204ENST00000448526 CIDEAO60543 219 aa12.05□□□□□ -0.48
CDKN1A-204ENST00000448526 HERVK_113P63121 156 aa12.05□□□□□ -0.48
CDKN1A-204ENST00000448526 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 PSMB2P49721 201 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 SH2D6Q7Z4S9 175 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 A0A0B4J2C4 111 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 IGLV5-39A0A0G2JS06 123 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 SPANXCQ9NY87 97 aa12.04□□□□□ -0.48
CDKN1A-204ENST00000448526 PRSS2P07478 247 aa12.03□□□□□ -0.48
CDKN1A-204ENST00000448526 DEFB130BP0DP73 79 aa12.03□□□□□ -0.48
CDKN1A-204ENST00000448526 DEFB130AP0DP74 79 aa12.03□□□□□ -0.48
CDKN1A-204ENST00000448526 X6R8D5 127 aa12.03□□□□□ -0.48
CDKN1A-204ENST00000448526 TCL1BO95988 128 aa12.02□□□□□ -0.48
CDKN1A-204ENST00000448526 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.48
CDKN1A-204ENST00000448526 ETDBQ3ZM63 59 aa12.02□□□□□ -0.48
CDKN1A-204ENST00000448526 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
CDKN1A-204ENST00000448526 UBE2L6O14933 153 aa12.02□□□□□ -0.49
CDKN1A-204ENST00000448526 NDUFA1O15239 70 aa12.02□□□□□ -0.49
CDKN1A-204ENST00000448526 NPC2P61916 151 aa12.02□□□□□ -0.49
CDKN1A-204ENST00000448526 MIAQ16674 131 aa12.02□□□□□ -0.49
CDKN1A-204ENST00000448526 LINC00612Q8N6U2 182 aa12.01□□□□□ -0.49
CDKN1A-204ENST00000448526 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
CDKN1A-204ENST00000448526 F5H768 121 aa12.01□□□□□ -0.49
CDKN1A-204ENST00000448526 H7C2G1 150 aa12.01□□□□□ -0.49
CDKN1A-204ENST00000448526 INSL3P51460 131 aa12.01□□□□□ -0.49
CDKN1A-204ENST00000448526 GAGE6Q13070 117 aa12.01□□□□□ -0.49
CDKN1A-204ENST00000448526 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms