RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 IGLV3-9A0A075B6K5 115 aa7.04□□□□□ -1.28
SMC6-207ENST00000448223 IGLV2-8P01709 118 aa7.04□□□□□ -1.28
SMC6-207ENST00000448223 HIVEP3Q5T1R4 2406 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 SLPIP03973 132 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 C20orf203Q8NBC4 194 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 NEXN-AS1Q8NBZ9 246 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 PRSS33Q8NF86 280 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 PIEZO1Q92508 2521 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 E7EQL1 145 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 H7C423 109 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 GRNP28799 593 aaKnown RBP7.03□□□□□ -1.28
SMC6-207ENST00000448223 LINC00311Q8N616 119 aa7.03□□□□□ -1.28
SMC6-207ENST00000448223 TRBV7-3A0A075B6L6 115 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 G3V318 75 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 LHBP01229 141 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 EBI3Q14213 229 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 PCSK5Q92824 1860 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 Q8N976 141 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 COX6B1P14854 86 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 CASC2Q6XLA1 102 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 LINC01619G3V211 115 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 IGHV4-59P01825 116 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 COX7BP24311 80 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 C9orf47Q6ZRZ4 202 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 UBE2DNLQ8IWF7 75 aa7.02□□□□□ -1.29
SMC6-207ENST00000448223 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
SMC6-207ENST00000448223 C4orf26Q17RF5 130 aa7.01□□□□□ -1.29
SMC6-207ENST00000448223 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
SMC6-207ENST00000448223 LAMA5O15230 3695 aa7.01□□□□□ -1.29
SMC6-207ENST00000448223 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
SMC6-207ENST00000448223 ZZEF1O43149 2961 aa7.01□□□□□ -1.29
SMC6-207ENST00000448223 DEFB112Q30KQ8 113 aa7.01□□□□□ -1.29
SMC6-207ENST00000448223 IGHV4-30-2A0A087WSY4 118 aa7□□□□□ -1.29
SMC6-207ENST00000448223 A0A096LPF7 62 aa7□□□□□ -1.29
SMC6-207ENST00000448223 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
SMC6-207ENST00000448223 IGHV7-4-1A0A0J9YVY3 117 aa7□□□□□ -1.29
SMC6-207ENST00000448223 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
SMC6-207ENST00000448223 MBD6Q96DN6 1003 aa7□□□□□ -1.29
SMC6-207ENST00000448223 MED14OSP0DP75 135 aa7□□□□□ -1.29
SMC6-207ENST00000448223 BRD3OSQ6XYD6 125 aa7□□□□□ -1.29
SMC6-207ENST00000448223 A0A087WVE0 104 aa7□□□□□ -1.29
SMC6-207ENST00000448223 CGB3P0DN86 165 aa7□□□□□ -1.29
SMC6-207ENST00000448223 CGB7P0DN87 165 aa7□□□□□ -1.29
SMC6-207ENST00000448223 IGKV1D-37A0A075B6S9 117 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 IGKV1-17P01599 117 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 SAA4P35542 130 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 GATA4P43694 442 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 DMXL1Q9Y485 3027 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 AKAP13Q12802 2813 aa6.99□□□□□ -1.29
SMC6-207ENST00000448223 A8MZ25 164 aa6.98□□□□□ -1.29
SMC6-207ENST00000448223 Q8N9L7 120 aa6.98□□□□□ -1.29
SMC6-207ENST00000448223 PYGO1Q9Y3Y4 419 aa6.98□□□□□ -1.29
SMC6-207ENST00000448223 NANOS2P60321 138 aaKnown RBP6.98□□□□□ -1.29
SMC6-207ENST00000448223 WFDC10BQ8IUB3 73 aa6.98□□□□□ -1.29
SMC6-207ENST00000448223 NAV2Q8IVL1 2488 aa6.98□□□□□ -1.29
SMC6-207ENST00000448223 LRRK2Q5S007 2527 aa6.98□□□□□ -1.29
SMC6-207ENST00000448223 IGLV10-54A0A075B6I4 117 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 COL12A1Q99715 3063 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 RMI2Q96E14 147 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 K7EQD1 137 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 PRYO14603 147 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 CCKP06307 115 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 WFDC10AQ9H1F0 79 aa6.97□□□□□ -1.29
SMC6-207ENST00000448223 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
SMC6-207ENST00000448223 PRAC2D3DTV9 90 aa6.96□□□□□ -1.29
SMC6-207ENST00000448223 TMEM263Q8WUH6 116 aaKnown RBP6.96□□□□□ -1.29
SMC6-207ENST00000448223 I3L2K1 104 aa6.96□□□□□ -1.3
SMC6-207ENST00000448223 NDUFA1O15239 70 aa6.96□□□□□ -1.3
SMC6-207ENST00000448223 NPBQ8NG41 125 aa6.96□□□□□ -1.3
SMC6-207ENST00000448223 ABCA12Q86UK0 2595 aa6.96□□□□□ -1.3
SMC6-207ENST00000448223 TRBV10-1A0A0K0K1A3 114 aa6.96□□□□□ -1.3
SMC6-207ENST00000448223 IGLV2-23P01705 113 aa6.96□□□□□ -1.3
SMC6-207ENST00000448223 CEMP1Q6PRD7 247 aaPredicted RBP6.95□□□□□ -1.3
SMC6-207ENST00000448223 ESRGQ1W209 222 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 DEFB1P60022 68 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 LRBAP50851 2863 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 IGKV2D-24A0A075B6R9 120 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 A0A0J9YWU9 116 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 AJUBAQ96IF1 538 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 PTPRBP23467 1997 aa6.95□□□□□ -1.3
SMC6-207ENST00000448223 K7EIM0 57 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 MTORP42345 2549 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 HOXB4P17483 251 aaPredicted RBP6.94□□□□□ -1.3
SMC6-207ENST00000448223 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 HIVEP2P31629 2446 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 FAM222AQ5U5X8 452 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 FAM30AQ9NZY2 134 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 CRYGAP11844 174 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 U3KQK5 164 aa6.94□□□□□ -1.3
SMC6-207ENST00000448223 CRIP2P52943 208 aaPredicted RBP6.93□□□□□ -1.3
SMC6-207ENST00000448223 UBE2D3P61077 147 aa6.93□□□□□ -1.3
SMC6-207ENST00000448223 UBE2D2P62837 147 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms