RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 hADV29S1A0JD25 119 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 KNCNA6PVL3 124 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 J3QQQ9 107 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 RPL39P62891 51 aaKnown RBP4.39□□□□□ -1.71
PROM1-201ENST00000447510 PDE6HQ13956 83 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 HRCT1Q6UXD1 115 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 LYPD1Q8N2G4 141 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 IGHV3-33P01772 117 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 PRB2P02812 416 aaPredicted RBP4.39□□□□□ -1.71
PROM1-201ENST00000447510 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 LINC01587Q99440 93 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 SPANXA1Q9NS26 97 aa4.39□□□□□ -1.71
PROM1-201ENST00000447510 TRAV13-1A0A0B4J241 112 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 TRBV10-2A0A0K0K1G8 114 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 IGLV1-51P01701 117 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 MRAPQ8TCY5 172 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 ZNF469Q96JG9 3925 aaPredicted RBP4.38□□□□□ -1.71
PROM1-201ENST00000447510 ANK3Q12955 4377 aaKnown RBP4.38□□□□□ -1.71
PROM1-201ENST00000447510 F5H768 121 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 F6UB75 175 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 M0R2P5 195 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 TRIAP1O43715 76 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 NEXN-AS1Q8NBZ9 246 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 OPRPNQ99935 248 aaPredicted RBP4.38□□□□□ -1.71
PROM1-201ENST00000447510 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 Q6Q795 121 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 SMAD5-AS1Q9Y6J3 95 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 U3KQE9 123 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 TRAV12-1A0A0B4J245 112 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 DEFB1P60022 68 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 NRACQ8N912 160 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 DSCR8Q96T75 97 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
PROM1-201ENST00000447510 K7EQG2 157 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 C1orf43Q9BWL3 253 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
PROM1-201ENST00000447510 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 XCL2Q9UBD3 114 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 A0A087WWL8 130 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
PROM1-201ENST00000447510 TRACP01848 142 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 SLC25A29Q8N8R3 303 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 DAND5Q8N907 189 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
PROM1-201ENST00000447510 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 UQCRQO14949 82 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 SPINK13Q1W4C9 94 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 LINC00477Q96M19 166 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 AGPAT4-IT1Q9H0P7 198 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 H7C423 109 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 APOC4P55056 127 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 SBSPONQ8IVN8 264 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 KIR2DL5BQ8NHK3 375 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 WFDC10AQ9H1F0 79 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 NOTCH1P46531 2555 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 RHOHQ15669 191 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
PROM1-201ENST00000447510 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
PROM1-201ENST00000447510 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
PROM1-201ENST00000447510 ZNF625Q96I27 306 aaPredicted RBP4.35□□□□□ -1.71
PROM1-201ENST00000447510 PKIGQ9Y2B9 76 aa4.35□□□□□ -1.71
PROM1-201ENST00000447510 DCANP1Q8TF63 244 aa4.35□□□□□ -1.71
PROM1-201ENST00000447510 DPH3P1Q9H4G8 78 aa4.35□□□□□ -1.71
PROM1-201ENST00000447510 TRAV12-2A0A075B6T6 113 aa4.35□□□□□ -1.71
PROM1-201ENST00000447510 TMEM263Q8WUH6 116 aaKnown RBP4.35□□□□□ -1.71
PROM1-201ENST00000447510 A0A1B0GX51 115 aa4.34□□□□□ -1.71
PROM1-201ENST00000447510 INSP01308 110 aa4.34□□□□□ -1.71
PROM1-201ENST00000447510 MRPL53Q96EL3 112 aaKnown RBP4.34□□□□□ -1.71
PROM1-201ENST00000447510 C20orf173Q96LM9 149 aa4.34□□□□□ -1.71
PROM1-201ENST00000447510 A0A0J9YXV3 536 aa4.34□□□□□ -1.71
PROM1-201ENST00000447510 ODF3L2Q3SX64 289 aa4.34□□□□□ -1.71
PROM1-201ENST00000447510 A0A0J9YX75 114 aa4.34□□□□□ -1.72
PROM1-201ENST00000447510 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.72
PROM1-201ENST00000447510 SDIM1Q6ZPB5 146 aa4.34□□□□□ -1.72
PROM1-201ENST00000447510 ZNRF2Q8NHG8 242 aa4.34□□□□□ -1.72
PROM1-201ENST00000447510 JPT2Q9H910 190 aa4.34□□□□□ -1.72
PROM1-201ENST00000447510 TENM1Q9UKZ4 2725 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 GNRH2O43555 120 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 TRAV21A0A0B4J279 112 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 A8MZ25 164 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 P0DMU3 169 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 FAM231AP0DMU4 169 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 FAM231CP0DMU5 169 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
PROM1-201ENST00000447510 IGLV4-69A0A075B6H9 119 aa4.32□□□□□ -1.72
PROM1-201ENST00000447510 H3BT86 120 aa4.32□□□□□ -1.72
PROM1-201ENST00000447510 CRYGDP07320 174 aa4.32□□□□□ -1.72
PROM1-201ENST00000447510 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms