RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 TRBV10-1A0A0K0K1A3 114 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 ZNF815PA8K554 130 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 DGAT2L7PQ6IED9 249 aa6.78□□□□□ -1.32
COL6A4P1-201ENST00000446690 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 FLNBO75369 2602 aaKnown RBP6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 F8W1H4 67 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 J3QR89 54 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 DEFB135Q30KP9 77 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 SCGB1D4Q6XE38 83 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 FAM104AQ969W3 186 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 HIST1H4GQ99525 98 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 VWFP04275 2813 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 DEFB4AO15263 64 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 CKS1BP61024 79 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 DAZ4Q86SG3 579 aaKnown RBP6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 DAZ3Q9NR90 486 aaKnown RBP6.77□□□□□ -1.33
COL6A4P1-201ENST00000446690 UBE2D3P61077 147 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 UBE2D2P62837 147 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 KRTAP24-1Q3LI83 254 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 Q6ZUT4 128 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 SH2D6Q7Z4S9 175 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 WFDC9Q8NEX5 89 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 AMELXQ99217 191 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 TM2D2Q9BX73 214 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 X6R8D5 127 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 F8P00451 2351 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 TRAV26-1A0A087WT03 109 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 IGLL5B9A064 214 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 APOC4P55056 127 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 FHL2Q14192 279 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 ETDBQ3ZM63 59 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 TRRAPQ9Y4A5 3859 aa6.76□□□□□ -1.33
COL6A4P1-201ENST00000446690 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 LINC00694P0DN24 101 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 CEND1Q8N111 149 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 C3orf56Q8N813 242 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 PLEKHB2Q96CS7 222 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 TMEM223A0PJW6 202 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 H3BMG7 143 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 TSPEAR-AS2P59090 65 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
COL6A4P1-201ENST00000446690 ATRQ13535 2644 aa6.74□□□□□ -1.33
COL6A4P1-201ENST00000446690 SMIM9A6NGZ8 99 aa6.74□□□□□ -1.33
COL6A4P1-201ENST00000446690 J3QQQ9 107 aa6.74□□□□□ -1.33
COL6A4P1-201ENST00000446690 UBE2L6O14933 153 aa6.74□□□□□ -1.33
COL6A4P1-201ENST00000446690 CRYBA4P53673 196 aa6.74□□□□□ -1.33
COL6A4P1-201ENST00000446690 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
COL6A4P1-201ENST00000446690 IGHV4-30-4P0DP06 118 aa6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 MRPS36P82909 103 aaKnown RBP6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 FAM222AQ5U5X8 452 aa6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 KIR2DL5BQ8NHK3 375 aa6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 CYSRT1A8MQ03 144 aa6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 TEP1Q99973 2627 aaKnown RBP6.73□□□□□ -1.33
COL6A4P1-201ENST00000446690 TRAV8-3A0A0A6YYJ7 113 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 LEPROTO15243 131 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 MTURNQ8N3F0 131 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 TAL2Q16559 108 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 C12orf74Q32Q52 190 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 TIMM21Q9BVV7 248 aa6.72□□□□□ -1.33
COL6A4P1-201ENST00000446690 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.33
COL6A4P1-201ENST00000446690 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.33
COL6A4P1-201ENST00000446690 SPINK8P0C7L1 97 aa6.71□□□□□ -1.33
COL6A4P1-201ENST00000446690 GYPEP15421 78 aa6.71□□□□□ -1.33
COL6A4P1-201ENST00000446690 UBE2D1P51668 147 aa6.71□□□□□ -1.33
COL6A4P1-201ENST00000446690 GAGE6Q13070 117 aa6.71□□□□□ -1.33
COL6A4P1-201ENST00000446690 A0A096LPF7 62 aa6.71□□□□□ -1.34
COL6A4P1-201ENST00000446690 IGHV3-30-3P0DP02 117 aa6.71□□□□□ -1.34
COL6A4P1-201ENST00000446690 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
COL6A4P1-201ENST00000446690 A0A0J9YY99 117 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 A8MZ25 164 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 COX6A2Q02221 97 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 SBSPONQ8IVN8 264 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 LINC00612Q8N6U2 182 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 CHCHD5Q9BSY4 110 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 IGKV3OR2-268A0A0C4DH90 116 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 LYRM9A8MSI8 78 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 CDKN2A-AS1Q9UH64 79 aa6.7□□□□□ -1.34
COL6A4P1-201ENST00000446690 NBEAL2Q6ZNJ1 2754 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 TRBV6-8A0A0A6YYG3 113 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 WIPF1O43516 503 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 KRTAP10-11P60412 298 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 DAD1P61803 113 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 PRIMA1Q86XR5 153 aa6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 CSDC2Q9Y534 153 aaKnown RBP6.69□□□□□ -1.34
COL6A4P1-201ENST00000446690 PAX4O43316 350 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms