RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TRAV9-2A0A087WT02 112 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 H7C423 109 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 K7EMI3 77 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 Q0VG73 95 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 CLPSL2Q6UWE3 100 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
LIME1-202ENST00000444951 LINC01546A6NGU7 62 aa11.63□□□□□ -0.55
LIME1-202ENST00000444951 Q6ZR54 194 aa11.63□□□□□ -0.55
LIME1-202ENST00000444951 OR5A1Q8NGJ0 315 aa11.63□□□□□ -0.55
LIME1-202ENST00000444951 CYSLTR1Q9Y271 337 aa11.63□□□□□ -0.55
LIME1-202ENST00000444951 SERF1AO75920 110 aa11.62□□□□□ -0.55
LIME1-202ENST00000444951 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
LIME1-202ENST00000444951 Q9HAA7 133 aa11.62□□□□□ -0.55
LIME1-202ENST00000444951 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
LIME1-202ENST00000444951 IGKV3OR2-268A0A0C4DH90 116 aa11.61□□□□□ -0.55
LIME1-202ENST00000444951 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
LIME1-202ENST00000444951 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
LIME1-202ENST00000444951 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
LIME1-202ENST00000444951 UBE2WQ96B02 151 aa11.61□□□□□ -0.55
LIME1-202ENST00000444951 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
LIME1-202ENST00000444951 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
LIME1-202ENST00000444951 A0A1B0GUV1 79 aa11.6□□□□□ -0.55
LIME1-202ENST00000444951 HSBP1O75506 76 aa11.6□□□□□ -0.55
LIME1-202ENST00000444951 ZNF25P17030 456 aaPredicted RBP11.6□□□□□ -0.55
LIME1-202ENST00000444951 G0S2P27469 103 aa11.6□□□□□ -0.55
LIME1-202ENST00000444951 NDUFA6P56556 154 aa11.6□□□□□ -0.55
LIME1-202ENST00000444951 MRPL52Q86TS9 123 aaKnown RBP11.6□□□□□ -0.55
LIME1-202ENST00000444951 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
LIME1-202ENST00000444951 NUPR1O60356 82 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 CRPP02741 224 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 LINC00310P59036 64 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 Q6ZUT4 128 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
LIME1-202ENST00000444951 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
LIME1-202ENST00000444951 HBDP02042 147 aa11.58□□□□□ -0.56
LIME1-202ENST00000444951 ZNF664Q8N3J9 261 aa11.58□□□□□ -0.56
LIME1-202ENST00000444951 SCGB3A1Q96QR1 104 aa11.58□□□□□ -0.56
LIME1-202ENST00000444951 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
LIME1-202ENST00000444951 APOBP04114 4563 aaKnown RBP11.57□□□□□ -0.56
LIME1-202ENST00000444951 A0A096LNJ9 63 aa11.57□□□□□ -0.56
LIME1-202ENST00000444951 REG3AQ06141 175 aa11.57□□□□□ -0.56
LIME1-202ENST00000444951 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
LIME1-202ENST00000444951 K7EP13 123 aa11.56□□□□□ -0.56
LIME1-202ENST00000444951 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
LIME1-202ENST00000444951 DNAH5Q8TE73 4624 aa11.56□□□□□ -0.56
LIME1-202ENST00000444951 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
LIME1-202ENST00000444951 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 ZC2HC1BQ5TFG8 222 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 ERASQ7Z444 233 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
LIME1-202ENST00000444951 IGKV2D-24A0A075B6R9 120 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 Q6ZN92 141 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 C6orf223Q8N319 242 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 TMEM141Q96I45 108 aa11.53□□□□□ -0.56
LIME1-202ENST00000444951 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
LIME1-202ENST00000444951 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
LIME1-202ENST00000444951 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
LIME1-202ENST00000444951 TIMM17AQ99595 171 aa11.52□□□□□ -0.57
LIME1-202ENST00000444951 VCX2Q9H322 139 aa11.52□□□□□ -0.57
LIME1-202ENST00000444951 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
LIME1-202ENST00000444951 LINC01549A6NIU2 74 aa11.51□□□□□ -0.57
LIME1-202ENST00000444951 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
LIME1-202ENST00000444951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.51□□□□□ -0.57
LIME1-202ENST00000444951 FABP4P15090 132 aa11.51□□□□□ -0.57
LIME1-202ENST00000444951 MIAQ16674 131 aa11.51□□□□□ -0.57
LIME1-202ENST00000444951 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
LIME1-202ENST00000444951 C1orf43Q9BWL3 253 aa11.51□□□□□ -0.57
LIME1-202ENST00000444951 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
LIME1-202ENST00000444951 TNP2Q05952 138 aa11.5□□□□□ -0.57
LIME1-202ENST00000444951 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
LIME1-202ENST00000444951 RMI2Q96E14 147 aa11.5□□□□□ -0.57
LIME1-202ENST00000444951 PSCAO43653 123 aa11.49□□□□□ -0.57
LIME1-202ENST00000444951 S100A6P06703 90 aa11.49□□□□□ -0.57
LIME1-202ENST00000444951 SS18Q15532 418 aa11.49□□□□□ -0.57
LIME1-202ENST00000444951 COA6Q5JTJ3 125 aaKnown RBP11.49□□□□□ -0.57
LIME1-202ENST00000444951 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
LIME1-202ENST00000444951 NFE4Q86UQ8 179 aa11.49□□□□□ -0.57
LIME1-202ENST00000444951 ATP5LO75964 103 aa11.48□□□□□ -0.57
LIME1-202ENST00000444951 LEPROTL1O95214 131 aa11.48□□□□□ -0.57
LIME1-202ENST00000444951 XCL1P47992 114 aa11.48□□□□□ -0.57
LIME1-202ENST00000444951 BAALCQ8WXS3 180 aa11.48□□□□□ -0.57
LIME1-202ENST00000444951 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
LIME1-202ENST00000444951 TMA7Q9Y2S6 64 aaKnown RBP11.48□□□□□ -0.57
LIME1-202ENST00000444951 CCL25O15444 150 aa11.47□□□□□ -0.57
LIME1-202ENST00000444951 NPSP0C0P6 89 aa11.47□□□□□ -0.57
LIME1-202ENST00000444951 CHCHD10Q8WYQ3 142 aaPredicted RBP11.47□□□□□ -0.57
LIME1-202ENST00000444951 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
LIME1-202ENST00000444951 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
LIME1-202ENST00000444951 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms