RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
SEMA3D-202ENST00000444867 LINC00694P0DN24 101 aa13.33□□□□□ -0.28
SEMA3D-202ENST00000444867 TM2D2Q9BX73 214 aa13.33□□□□□ -0.28
SEMA3D-202ENST00000444867 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
SEMA3D-202ENST00000444867 MIFP14174 115 aa13.32□□□□□ -0.28
SEMA3D-202ENST00000444867 CEND1Q8N111 149 aa13.32□□□□□ -0.28
SEMA3D-202ENST00000444867 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
SEMA3D-202ENST00000444867 TMEM243Q9BU79 118 aa13.32□□□□□ -0.28
SEMA3D-202ENST00000444867 LOC100131303A0A0U1RQF7 123 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 J3QQQ9 107 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 GCSHP23434 173 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 MDFIQ99750 246 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 VWFP04275 2813 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 H3BRM9 83 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 LGALS3P17931 250 aaKnown RBP13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 UBE2D1P51668 147 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
SEMA3D-202ENST00000444867 RNASE13Q5GAN3 156 aaKnown RBP13.3□□□□□ -0.28
SEMA3D-202ENST00000444867 RNF183Q96D59 192 aa13.3□□□□□ -0.28
SEMA3D-202ENST00000444867 IGHV4-28A0A0C4DH34 117 aa13.29□□□□□ -0.28
SEMA3D-202ENST00000444867 UBE2L6O14933 153 aa13.29□□□□□ -0.28
SEMA3D-202ENST00000444867 TIRAPP58753 221 aa13.29□□□□□ -0.28
SEMA3D-202ENST00000444867 SCGB1D4Q6XE38 83 aa13.29□□□□□ -0.28
SEMA3D-202ENST00000444867 HIST1H4GQ99525 98 aa13.29□□□□□ -0.28
SEMA3D-202ENST00000444867 TSPEAR-AS2P59090 65 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 FAM19A3Q7Z5A8 133 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 OR5A1Q8NGJ0 315 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 FXYD2P54710 66 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 EGFEM1PQ0D2K5 195 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 AMMECR1LQ6DCA0 310 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 Q6ZVH6 145 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 LINC00469Q8N7U9 141 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 Q8NAQ8 132 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 GEMIN7Q9H840 131 aaKnown RBP13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 STAB1Q9NY15 2570 aa13.28□□□□□ -0.28
SEMA3D-202ENST00000444867 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
SEMA3D-202ENST00000444867 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 TRBV6-8A0A0A6YYG3 113 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 A8MZ25 164 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 SMIM13P0DJ93 91 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 KRTAP21-3Q3LHN1 58 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 OXLD1Q5BKU9 147 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 CDC42SE2Q9NRR3 84 aa13.26□□□□□ -0.29
SEMA3D-202ENST00000444867 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
SEMA3D-202ENST00000444867 A0A0J9YY99 117 aa13.25□□□□□ -0.29
SEMA3D-202ENST00000444867 HERVK_113P63121 156 aa13.25□□□□□ -0.29
SEMA3D-202ENST00000444867 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SEMA3D-202ENST00000444867 GYPEP15421 78 aa13.24□□□□□ -0.29
SEMA3D-202ENST00000444867 C9orf118A6NHY6 69 aa13.24□□□□□ -0.29
SEMA3D-202ENST00000444867 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
SEMA3D-202ENST00000444867 DAD1P61803 113 aa13.24□□□□□ -0.29
SEMA3D-202ENST00000444867 KRTAP10-11P60412 298 aa13.23□□□□□ -0.29
SEMA3D-202ENST00000444867 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
SEMA3D-202ENST00000444867 SPART-AS1P0CW21 52 aa13.22□□□□□ -0.29
SEMA3D-202ENST00000444867 VAMP3Q15836 100 aa13.22□□□□□ -0.29
SEMA3D-202ENST00000444867 VSIG2Q96IQ7 327 aa13.22□□□□□ -0.29
SEMA3D-202ENST00000444867 IGHV3-64A0A075B6Q5 118 aa13.21□□□□□ -0.29
SEMA3D-202ENST00000444867 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.29
SEMA3D-202ENST00000444867 PAX4O43316 350 aa13.21□□□□□ -0.29
SEMA3D-202ENST00000444867 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEMA3D-202ENST00000444867 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
SEMA3D-202ENST00000444867 LINC00242Q5T6M2 205 aa13.21□□□□□ -0.29
SEMA3D-202ENST00000444867 TMEM238LA0A1B0GVL6 79 aa13.21□□□□□ -0.3
SEMA3D-202ENST00000444867 A6NJY4 79 aa13.21□□□□□ -0.3
SEMA3D-202ENST00000444867 K7EP13 123 aa13.21□□□□□ -0.3
SEMA3D-202ENST00000444867 DEFB4AO15263 64 aa13.21□□□□□ -0.3
SEMA3D-202ENST00000444867 ATP5G1P05496 136 aa13.21□□□□□ -0.3
SEMA3D-202ENST00000444867 NHP2Q9NX24 153 aaKnown RBP13.21□□□□□ -0.3
SEMA3D-202ENST00000444867 CDKN2A-AS1Q9UH64 79 aa13.2□□□□□ -0.3
SEMA3D-202ENST00000444867 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
SEMA3D-202ENST00000444867 GAGE6Q13070 117 aa13.19□□□□□ -0.3
SEMA3D-202ENST00000444867 CHCHD5Q9BSY4 110 aa13.19□□□□□ -0.3
SEMA3D-202ENST00000444867 ANK2Q01484 3957 aa13.19□□□□□ -0.3
SEMA3D-202ENST00000444867 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
SEMA3D-202ENST00000444867 SPINK8P0C7L1 97 aa13.18□□□□□ -0.3
SEMA3D-202ENST00000444867 C12orf74Q32Q52 190 aa13.17□□□□□ -0.3
SEMA3D-202ENST00000444867 RAB37Q96AX2 223 aa13.17□□□□□ -0.3
SEMA3D-202ENST00000444867 CELA1Q9UNI1 258 aa13.17□□□□□ -0.3
SEMA3D-202ENST00000444867 TRAV13-1A0A0B4J241 112 aa13.17□□□□□ -0.3
SEMA3D-202ENST00000444867 TMEM238C9JI98 176 aa13.17□□□□□ -0.3
SEMA3D-202ENST00000444867 COX6A2Q02221 97 aa13.17□□□□□ -0.3
SEMA3D-202ENST00000444867 TRRAPQ9Y4A5 3859 aa13.16□□□□□ -0.3
SEMA3D-202ENST00000444867 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
SEMA3D-202ENST00000444867 H3BUT2 72 aa13.16□□□□□ -0.3
SEMA3D-202ENST00000444867 ZFAND6Q6FIF0 208 aa13.16□□□□□ -0.3
SEMA3D-202ENST00000444867 C10orf126Q8N4M7 172 aa13.16□□□□□ -0.3
SEMA3D-202ENST00000444867 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.3
SEMA3D-202ENST00000444867 A0A0J9YXY3 114 aa13.15□□□□□ -0.3
SEMA3D-202ENST00000444867 IGHV3-30P01768 117 aa13.15□□□□□ -0.3
SEMA3D-202ENST00000444867 IGHV3-30-5P0DP03 117 aa13.15□□□□□ -0.3
SEMA3D-202ENST00000444867 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
SEMA3D-202ENST00000444867 K7ERJ3 54 aa13.14□□□□□ -0.31
SEMA3D-202ENST00000444867 A0A1B0GUV1 79 aa13.13□□□□□ -0.31
SEMA3D-202ENST00000444867 A0A1W2PPM0 123 aa13.13□□□□□ -0.31
SEMA3D-202ENST00000444867 CCL25O15444 150 aa13.13□□□□□ -0.31
SEMA3D-202ENST00000444867 SH2D6Q7Z4S9 175 aa13.13□□□□□ -0.31
SEMA3D-202ENST00000444867 DNHD1Q96M86 4753 aa13.13□□□□□ -0.31
SEMA3D-202ENST00000444867 IGLV4-60A0A075B6I1 120 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms